Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 IGHV3-71-201ENST00000523324 359 ntBASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 AL022326.1-202ENST00000641533 845 ntBASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC85CA6NKD9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 CRB3P1-201ENST00000449338 276 ntBASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 AC004877.2-201ENST00000623941 599 ntBASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC85CA6NKD9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC85CA6NKD9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC85CA6NKD9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC85CA6NKD9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC85CA6NKD9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC85CA6NKD9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC85CA6NKD9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC85CA6NKD9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC85CA6NKD9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC85CA6NKD9 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.33■□□□□ 0.85
CCDC85CA6NKD9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC85CA6NKD9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC85CA6NKD9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC85CA6NKD9 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC85CA6NKD9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.33■□□□□ 0.85
CCDC85CA6NKD9 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC85CA6NKD9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC85CA6NKD9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC85CA6NKD9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CCDC85CA6NKD9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 AL596325.1-201ENST00000563991 1082 ntBASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 AC007225.1-201ENST00000566331 1836 ntBASIC20.32■□□□□ 0.84
CCDC85CA6NKD9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC85CA6NKD9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85CA6NKD9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC85CA6NKD9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85CA6NKD9 BCAR1-209ENST00000546196 1340 ntBASIC20.31■□□□□ 0.84
CCDC85CA6NKD9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85CA6NKD9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85CA6NKD9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC85CA6NKD9 AC125634.1-201ENST00000438758 1403 ntBASIC20.31■□□□□ 0.84
CCDC85CA6NKD9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85CA6NKD9 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85CA6NKD9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85CA6NKD9 AC003669.1-201ENST00000334569 611 ntBASIC20.31■□□□□ 0.84
CCDC85CA6NKD9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms