Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 LBH-204ENST00000406087 559 ntTSL 4 BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 ABCD1P5-201ENST00000445663 754 ntBASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 AC034105.1-201ENST00000563488 319 ntBASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 AC140113.2-201ENST00000604370 208 ntBASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC28.31■■■□□ 2.12
PLEKHD1A6NEE1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 AL356488.2-201ENST00000602755 427 ntBASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 AL691403.2-201ENST00000618460 490 ntBASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC28.3■■■□□ 2.12
PLEKHD1A6NEE1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC28.29■■■□□ 2.12
PLEKHD1A6NEE1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
PLEKHD1A6NEE1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PLEKHD1A6NEE1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
PLEKHD1A6NEE1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PLEKHD1A6NEE1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
PLEKHD1A6NEE1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC28.29■■■□□ 2.12
PLEKHD1A6NEE1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC28.29■■■□□ 2.12
PLEKHD1A6NEE1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PLEKHD1A6NEE1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC28.29■■■□□ 2.12
PLEKHD1A6NEE1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PLEKHD1A6NEE1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC28.29■■■□□ 2.12
PLEKHD1A6NEE1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC28.29■■■□□ 2.12
PLEKHD1A6NEE1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PLEKHD1A6NEE1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC28.29■■■□□ 2.12
PLEKHD1A6NEE1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC28.29■■■□□ 2.12
PLEKHD1A6NEE1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PLEKHD1A6NEE1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PLEKHD1A6NEE1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PLEKHD1A6NEE1 AL024508.2-201ENST00000607749 1894 ntBASIC28.28■■■□□ 2.12
PLEKHD1A6NEE1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC28.28■■■□□ 2.12
PLEKHD1A6NEE1 AC012640.2-201ENST00000561606 901 ntBASIC28.28■■■□□ 2.12
PLEKHD1A6NEE1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
PLEKHD1A6NEE1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC28.28■■■□□ 2.12
PLEKHD1A6NEE1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PLEKHD1A6NEE1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PLEKHD1A6NEE1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC28.28■■■□□ 2.12
PLEKHD1A6NEE1 HLA-J-201ENST00000462773 1622 ntBASIC28.28■■■□□ 2.12
PLEKHD1A6NEE1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 SDHAP2-201ENST00000455183 2001 ntBASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PLEKHD1A6NEE1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
PLEKHD1A6NEE1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.12
PLEKHD1A6NEE1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
PLEKHD1A6NEE1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
PLEKHD1A6NEE1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
PLEKHD1A6NEE1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms