Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRIT2A6NDA9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LRIT2A6NDA9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRIT2A6NDA9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LRIT2A6NDA9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LRIT2A6NDA9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.55■□□□□ 0.4
LRIT2A6NDA9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LRIT2A6NDA9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 AC117947.1-201ENST00000427448 529 ntBASIC17.54■□□□□ 0.4
LRIT2A6NDA9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.54■□□□□ 0.4
LRIT2A6NDA9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 AC006011.2-201ENST00000621313 1158 ntBASIC17.53■□□□□ 0.4
LRIT2A6NDA9 NEFHP1-201ENST00000412845 2629 ntBASIC17.53■□□□□ 0.4
LRIT2A6NDA9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 BICD1-207ENST00000551848 1962 ntBASIC17.53■□□□□ 0.4
LRIT2A6NDA9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
LRIT2A6NDA9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT2A6NDA9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.52■□□□□ 0.4
LRIT2A6NDA9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT2A6NDA9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT2A6NDA9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT2A6NDA9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT2A6NDA9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LRIT2A6NDA9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
LRIT2A6NDA9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
LRIT2A6NDA9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.52■□□□□ 0.4
LRIT2A6NDA9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.52■□□□□ 0.4
LRIT2A6NDA9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.52■□□□□ 0.4
LRIT2A6NDA9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LRIT2A6NDA9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.52■□□□□ 0.39
LRIT2A6NDA9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRIT2A6NDA9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
LRIT2A6NDA9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRIT2A6NDA9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 AC104076.2-201ENST00000448912 469 ntBASIC17.51■□□□□ 0.39
LRIT2A6NDA9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT2A6NDA9 AC034232.1-201ENST00000506026 1064 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms