Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 AC092118.2-201ENST00000613495 667 ntBASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 PRSS44-201ENST00000515154 1146 ntBASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TCRBV3S1A0A5B6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.27■□□□□ 0.35
TCRBV3S1A0A5B6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV3S1A0A5B6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV3S1A0A5B6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV3S1A0A5B6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.27■□□□□ 0.35
TCRBV3S1A0A5B6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV3S1A0A5B6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.27■□□□□ 0.35
TCRBV3S1A0A5B6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV3S1A0A5B6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV3S1A0A5B6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV3S1A0A5B6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV3S1A0A5B6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCRBV3S1A0A5B6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 AL118508.1-201ENST00000613502 2345 ntBASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 AC060766.5-201ENST00000590539 871 ntBASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 AC092437.1-201ENST00000624794 1048 ntBASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms