Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 KRT18P67-201ENST00000432816 1264 ntBASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 AF186996.4-201ENST00000467186 377 ntBASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 MIR5100-201ENST00000579544 119 ntBASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 AL671883.3-201ENST00000603274 991 ntBASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 AF228730.7-201ENST00000641842 219 ntBASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
CCDC187A0A096LP49 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 AC096582.2-201ENST00000510860 516 ntBASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 AC114341.1-201ENST00000618070 349 ntBASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 HEIH-201ENST00000623091 1652 ntBASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC187A0A096LP49 AL357033.4-201ENST00000617703 1807 ntBASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 AL163051.1-201ENST00000569214 1512 ntBASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 AL031284.1-201ENST00000419297 478 ntBASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 AC093909.1-201ENST00000504731 1122 ntBASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 RNA5SP419-201ENST00000515908 135 ntBASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 KRT18P41-201ENST00000518924 1277 ntBASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 AFG3L1P-217ENST00000557444 2447 ntBASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC187A0A096LP49 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms