Protein–RNA interactions for Protein: Q9Y6M7

SLC4A7, Sodium bicarbonate cotransporter 3, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A7Q9Y6M7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC4A7Q9Y6M7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC4A7Q9Y6M7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
SLC4A7Q9Y6M7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC4A7Q9Y6M7 AC087289.5-201ENST00000586076 3175 ntBASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 MIR564-202ENST00000385049 94 ntBASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 MIR940-201ENST00000401276 94 ntBASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 BX842568.4-201ENST00000421222 227 ntBASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 AC009065.1-201ENST00000564055 1225 ntBASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 AC148477.8-201ENST00000624298 468 ntBASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC4A7Q9Y6M7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 AL353692.3-201ENST00000407031 1396 ntBASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC4A7Q9Y6M7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC4A7Q9Y6M7 AC243591.1-201ENST00000452967 1364 ntBASIC20.08■□□□□ 0.81
SLC4A7Q9Y6M7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC4A7Q9Y6M7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SLC4A7Q9Y6M7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC4A7Q9Y6M7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
SLC4A7Q9Y6M7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC4A7Q9Y6M7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC4A7Q9Y6M7 RPL13AP23-201ENST00000480739 586 ntBASIC20.08■□□□□ 0.81
SLC4A7Q9Y6M7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.08■□□□□ 0.81
SLC4A7Q9Y6M7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.08■□□□□ 0.81
SLC4A7Q9Y6M7 MIR5100-201ENST00000579544 119 ntBASIC20.08■□□□□ 0.81
SLC4A7Q9Y6M7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.08■□□□□ 0.81
SLC4A7Q9Y6M7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.08■□□□□ 0.81
SLC4A7Q9Y6M7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.08■□□□□ 0.81
SLC4A7Q9Y6M7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SLC4A7Q9Y6M7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC4A7Q9Y6M7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.08■□□□□ 0.8
SLC4A7Q9Y6M7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.08■□□□□ 0.8
SLC4A7Q9Y6M7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.08■□□□□ 0.8
SLC4A7Q9Y6M7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC4A7Q9Y6M7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC4A7Q9Y6M7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms