Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC29.23■■■□□ 2.27
RIMBP3Q9UFD9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
RIMBP3Q9UFD9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
RIMBP3Q9UFD9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC29.23■■■□□ 2.27
RIMBP3Q9UFD9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC29.23■■■□□ 2.27
RIMBP3Q9UFD9 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
RIMBP3Q9UFD9 SLC25A6P5-201ENST00000435663 894 ntBASIC29.23■■■□□ 2.27
RIMBP3Q9UFD9 COX11-202ENST00000571584 1108 ntTSL 2 BASIC29.23■■■□□ 2.27
RIMBP3Q9UFD9 LINC01521-201ENST00000504184 1943 ntBASIC29.23■■■□□ 2.27
RIMBP3Q9UFD9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
RIMBP3Q9UFD9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
RIMBP3Q9UFD9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
RIMBP3Q9UFD9 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
RIMBP3Q9UFD9 KATNBL1P6-202ENST00000562413 1466 ntBASIC29.22■■■□□ 2.27
RIMBP3Q9UFD9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC29.22■■■□□ 2.27
RIMBP3Q9UFD9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC29.22■■■□□ 2.27
RIMBP3Q9UFD9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
RIMBP3Q9UFD9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
RIMBP3Q9UFD9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC29.22■■■□□ 2.27
RIMBP3Q9UFD9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC29.22■■■□□ 2.27
RIMBP3Q9UFD9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
RIMBP3Q9UFD9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
RIMBP3Q9UFD9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC29.22■■■□□ 2.27
RIMBP3Q9UFD9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC29.22■■■□□ 2.27
RIMBP3Q9UFD9 AC091812.2-201ENST00000619081 385 ntBASIC29.22■■■□□ 2.27
RIMBP3Q9UFD9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC29.22■■■□□ 2.27
RIMBP3Q9UFD9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC29.22■■■□□ 2.27
RIMBP3Q9UFD9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
RIMBP3Q9UFD9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RIMBP3Q9UFD9 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
RIMBP3Q9UFD9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
RIMBP3Q9UFD9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RIMBP3Q9UFD9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC29.21■■■□□ 2.27
RIMBP3Q9UFD9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC29.21■■■□□ 2.27
RIMBP3Q9UFD9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
RIMBP3Q9UFD9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RIMBP3Q9UFD9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC29.21■■■□□ 2.27
RIMBP3Q9UFD9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC29.21■■■□□ 2.27
RIMBP3Q9UFD9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC29.21■■■□□ 2.27
RIMBP3Q9UFD9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC29.21■■■□□ 2.27
RIMBP3Q9UFD9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
RIMBP3Q9UFD9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC29.21■■■□□ 2.27
RIMBP3Q9UFD9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC29.2■■■□□ 2.27
RIMBP3Q9UFD9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
RIMBP3Q9UFD9 INGX-202ENST00000489074 768 ntBASIC29.2■■■□□ 2.27
RIMBP3Q9UFD9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
RIMBP3Q9UFD9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC29.2■■■□□ 2.27
RIMBP3Q9UFD9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.27
RIMBP3Q9UFD9 AC009093.7-201ENST00000623853 1223 ntBASIC29.2■■■□□ 2.27
RIMBP3Q9UFD9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
RIMBP3Q9UFD9 AL022326.1-202ENST00000641533 845 ntBASIC29.2■■■□□ 2.27
RIMBP3Q9UFD9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
RIMBP3Q9UFD9 AL357033.4-201ENST00000617703 1807 ntBASIC29.2■■■□□ 2.27
RIMBP3Q9UFD9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
RIMBP3Q9UFD9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.26
RIMBP3Q9UFD9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
RIMBP3Q9UFD9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC29.2■■■□□ 2.26
RIMBP3Q9UFD9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
RIMBP3Q9UFD9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
RIMBP3Q9UFD9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC29.2■■■□□ 2.26
RIMBP3Q9UFD9 COX5BP8-201ENST00000416911 349 ntBASIC29.2■■■□□ 2.26
RIMBP3Q9UFD9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
RIMBP3Q9UFD9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC29.2■■■□□ 2.26
RIMBP3Q9UFD9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
RIMBP3Q9UFD9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
RIMBP3Q9UFD9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC29.2■■■□□ 2.26
RIMBP3Q9UFD9 AC105339.1-204ENST00000636249 355 ntBASIC29.2■■■□□ 2.26
RIMBP3Q9UFD9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC29.19■■■□□ 2.26
RIMBP3Q9UFD9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC29.19■■■□□ 2.26
RIMBP3Q9UFD9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RIMBP3Q9UFD9 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RIMBP3Q9UFD9 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC29.19■■■□□ 2.26
RIMBP3Q9UFD9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC29.19■■■□□ 2.26
RIMBP3Q9UFD9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC29.19■■■□□ 2.26
RIMBP3Q9UFD9 CR383656.12-201ENST00000549567 513 ntBASIC29.19■■■□□ 2.26
RIMBP3Q9UFD9 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC29.19■■■□□ 2.26
RIMBP3Q9UFD9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
RIMBP3Q9UFD9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC29.19■■■□□ 2.26
RIMBP3Q9UFD9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
RIMBP3Q9UFD9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RIMBP3Q9UFD9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RIMBP3Q9UFD9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
RIMBP3Q9UFD9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
RIMBP3Q9UFD9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RIMBP3Q9UFD9 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
RIMBP3Q9UFD9 ADH5P3-201ENST00000433842 1137 ntBASIC29.18■■■□□ 2.26
RIMBP3Q9UFD9 VN2R19P-201ENST00000442399 1052 ntBASIC29.18■■■□□ 2.26
RIMBP3Q9UFD9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC29.18■■■□□ 2.26
RIMBP3Q9UFD9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC29.18■■■□□ 2.26
RIMBP3Q9UFD9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC29.18■■■□□ 2.26
RIMBP3Q9UFD9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
RIMBP3Q9UFD9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
RIMBP3Q9UFD9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
RIMBP3Q9UFD9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
RIMBP3Q9UFD9 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
RIMBP3Q9UFD9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC29.17■■■□□ 2.26
RIMBP3Q9UFD9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC29.17■■■□□ 2.26
RIMBP3Q9UFD9 KRT19P2-202ENST00000557173 1012 ntBASIC29.17■■■□□ 2.26
RIMBP3Q9UFD9 AC116407.2-201ENST00000613639 860 ntBASIC29.17■■■□□ 2.26
RIMBP3Q9UFD9 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC29.17■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms