Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR9Q9NR96 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR9Q9NR96 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR9Q9NR96 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR9Q9NR96 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR9Q9NR96 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR9Q9NR96 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR9Q9NR96 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 KRT18P67-201ENST00000432816 1264 ntBASIC19.56■□□□□ 0.72
TLR9Q9NR96 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR9Q9NR96 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TLR9Q9NR96 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 BNIP3P18-201ENST00000593976 575 ntBASIC19.56■□□□□ 0.72
TLR9Q9NR96 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.56■□□□□ 0.72
TLR9Q9NR96 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR9Q9NR96 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR9Q9NR96 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TLR9Q9NR96 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR9Q9NR96 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR9Q9NR96 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
TLR9Q9NR96 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TLR9Q9NR96 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.55■□□□□ 0.72
TLR9Q9NR96 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TLR9Q9NR96 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TLR9Q9NR96 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TLR9Q9NR96 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.55■□□□□ 0.72
TLR9Q9NR96 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TLR9Q9NR96 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.55■□□□□ 0.72
TLR9Q9NR96 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TLR9Q9NR96 AL031284.1-201ENST00000419297 478 ntBASIC19.55■□□□□ 0.72
TLR9Q9NR96 AF186996.4-201ENST00000467186 377 ntBASIC19.55■□□□□ 0.72
TLR9Q9NR96 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TLR9Q9NR96 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TLR9Q9NR96 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TLR9Q9NR96 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.55■□□□□ 0.72
TLR9Q9NR96 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.55■□□□□ 0.72
TLR9Q9NR96 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.55■□□□□ 0.72
TLR9Q9NR96 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TLR9Q9NR96 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TLR9Q9NR96 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TLR9Q9NR96 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.55■□□□□ 0.72
TLR9Q9NR96 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TLR9Q9NR96 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TLR9Q9NR96 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TLR9Q9NR96 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TLR9Q9NR96 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.54■□□□□ 0.72
TLR9Q9NR96 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TLR9Q9NR96 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TLR9Q9NR96 KRT8P50-201ENST00000562022 1438 ntBASIC19.54■□□□□ 0.72
TLR9Q9NR96 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TLR9Q9NR96 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TLR9Q9NR96 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.54■□□□□ 0.72
TLR9Q9NR96 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.54■□□□□ 0.72
TLR9Q9NR96 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.54■□□□□ 0.72
TLR9Q9NR96 AC096582.2-201ENST00000510860 516 ntBASIC19.54■□□□□ 0.72
TLR9Q9NR96 SLC25A1P1-201ENST00000528351 927 ntBASIC19.54■□□□□ 0.72
TLR9Q9NR96 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.54■□□□□ 0.72
TLR9Q9NR96 MIR5100-201ENST00000579544 119 ntBASIC19.54■□□□□ 0.72
TLR9Q9NR96 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.54■□□□□ 0.72
TLR9Q9NR96 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TLR9Q9NR96 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TLR9Q9NR96 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TLR9Q9NR96 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.54■□□□□ 0.72
TLR9Q9NR96 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TLR9Q9NR96 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TLR9Q9NR96 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.54■□□□□ 0.72
TLR9Q9NR96 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.53■□□□□ 0.72
TLR9Q9NR96 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TLR9Q9NR96 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TLR9Q9NR96 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TLR9Q9NR96 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TLR9Q9NR96 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TLR9Q9NR96 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.53■□□□□ 0.72
TLR9Q9NR96 AL158211.5-201ENST00000623583 2518 ntBASIC19.53■□□□□ 0.72
TLR9Q9NR96 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TLR9Q9NR96 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TLR9Q9NR96 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.53■□□□□ 0.72
TLR9Q9NR96 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.53■□□□□ 0.72
TLR9Q9NR96 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TLR9Q9NR96 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.53■□□□□ 0.72
TLR9Q9NR96 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TLR9Q9NR96 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TLR9Q9NR96 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TLR9Q9NR96 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.53■□□□□ 0.72
TLR9Q9NR96 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TLR9Q9NR96 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms