Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 NUS1P1-201ENST00000446295 882 ntBASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 AC104390.1-201ENST00000555663 520 ntBASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 AC010240.3-201ENST00000607688 395 ntBASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.47■□□□□ 0.55
TM9SF3Q9HD45 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 HOXB1-202ENST00000577092 1414 ntBASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 AC026471.1-201ENST00000564629 3026 ntBASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF3Q9HD45 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TM9SF3Q9HD45 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
TM9SF3Q9HD45 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 DRAXINP1-201ENST00000437611 948 ntBASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TM9SF3Q9HD45 TPSP2-201ENST00000561760 610 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms