Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 AL136038.3-201ENST00000561909 1096 ntBASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 AC083849.1-201ENST00000615227 514 ntBASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF304Q9HCX3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 HBZP1-201ENST00000354915 429 ntBASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 AC092597.1-201ENST00000487352 616 ntBASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 VENTXP5-201ENST00000523979 775 ntBASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 AP000550.4-202ENST00000639755 178 ntBASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 AL356309.3-201ENST00000624132 1934 ntBASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ZNF304Q9HCX3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 IER3-202ENST00000376377 1350 ntBASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.53■□□□□ 0.4
ZNF304Q9HCX3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 AC005332.1-201ENST00000577698 1310 ntBASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 MIR3180-4-201ENST00000582223 153 ntBASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.52■□□□□ 0.4
ZNF304Q9HCX3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms