Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.92■□□□□ 0.78
NXF3Q9H4D5 AC112777.1-201ENST00000540175 1423 ntBASIC19.92■□□□□ 0.78
NXF3Q9H4D5 SDHAP2-201ENST00000455183 2001 ntBASIC19.92■□□□□ 0.78
NXF3Q9H4D5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 DRAXINP1-201ENST00000437611 948 ntBASIC19.91■□□□□ 0.78
NXF3Q9H4D5 LINC00265-3P-201ENST00000447588 903 ntBASIC19.91■□□□□ 0.78
NXF3Q9H4D5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 PRELID1P1-202ENST00000567272 903 ntBASIC19.91■□□□□ 0.78
NXF3Q9H4D5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 KRT89P-201ENST00000620027 1478 ntBASIC19.91■□□□□ 0.78
NXF3Q9H4D5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.91■□□□□ 0.78
NXF3Q9H4D5 ANO7L1-203ENST00000602586 1720 ntBASIC19.9■□□□□ 0.78
NXF3Q9H4D5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 TOB2P1-201ENST00000469761 992 ntBASIC19.9■□□□□ 0.78
NXF3Q9H4D5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
NXF3Q9H4D5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NXF3Q9H4D5 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.89■□□□□ 0.77
NXF3Q9H4D5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NXF3Q9H4D5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NXF3Q9H4D5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NXF3Q9H4D5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.89■□□□□ 0.77
NXF3Q9H4D5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.89■□□□□ 0.77
NXF3Q9H4D5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.89■□□□□ 0.77
NXF3Q9H4D5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NXF3Q9H4D5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NXF3Q9H4D5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.89■□□□□ 0.77
NXF3Q9H4D5 AC090616.6-201ENST00000582640 721 ntBASIC19.89■□□□□ 0.77
NXF3Q9H4D5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
NXF3Q9H4D5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.89■□□□□ 0.77
NXF3Q9H4D5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
NXF3Q9H4D5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NXF3Q9H4D5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms