Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC22.16■■□□□ 1.14
VPS33BQ9H267 AC140113.2-201ENST00000604370 208 ntBASIC22.16■■□□□ 1.14
VPS33BQ9H267 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33BQ9H267 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC22.16■■□□□ 1.14
VPS33BQ9H267 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
VPS33BQ9H267 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33BQ9H267 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33BQ9H267 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33BQ9H267 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS33BQ9H267 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33BQ9H267 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33BQ9H267 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.15■■□□□ 1.14
VPS33BQ9H267 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33BQ9H267 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33BQ9H267 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS33BQ9H267 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33BQ9H267 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS33BQ9H267 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS33BQ9H267 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS33BQ9H267 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS33BQ9H267 SART3-203ENST00000546611 1184 ntBASIC22.15■■□□□ 1.14
VPS33BQ9H267 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC22.15■■□□□ 1.14
VPS33BQ9H267 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS33BQ9H267 AL691403.2-201ENST00000618460 490 ntBASIC22.15■■□□□ 1.14
VPS33BQ9H267 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
VPS33BQ9H267 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33BQ9H267 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33BQ9H267 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33BQ9H267 AL356309.3-201ENST00000624132 1934 ntBASIC22.15■■□□□ 1.14
VPS33BQ9H267 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33BQ9H267 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
VPS33BQ9H267 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS33BQ9H267 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS33BQ9H267 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS33BQ9H267 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS33BQ9H267 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS33BQ9H267 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.14■■□□□ 1.13
VPS33BQ9H267 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.14■■□□□ 1.13
VPS33BQ9H267 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22.14■■□□□ 1.13
VPS33BQ9H267 OR7E14P-202ENST00000530490 1290 ntBASIC22.14■■□□□ 1.13
VPS33BQ9H267 PAM16-208ENST00000573553 722 ntTSL 2 BASIC22.14■■□□□ 1.13
VPS33BQ9H267 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS33BQ9H267 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS33BQ9H267 AL139288.1-201ENST00000623748 933 ntBASIC22.14■■□□□ 1.13
VPS33BQ9H267 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC22.14■■□□□ 1.13
VPS33BQ9H267 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS33BQ9H267 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS33BQ9H267 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.14■■□□□ 1.13
VPS33BQ9H267 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VPS33BQ9H267 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS33BQ9H267 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS33BQ9H267 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS33BQ9H267 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS33BQ9H267 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS33BQ9H267 NARF-204ENST00000390006 1766 ntTSL 2 BASIC22.13■■□□□ 1.13
VPS33BQ9H267 RPSAP43-201ENST00000402237 625 ntBASIC22.13■■□□□ 1.13
VPS33BQ9H267 GGCT-205ENST00000409436 954 ntTSL 3 BASIC22.13■■□□□ 1.13
VPS33BQ9H267 RAB17-203ENST00000409576 466 ntTSL 3 BASIC22.13■■□□□ 1.13
VPS33BQ9H267 MED15P5-201ENST00000423150 992 ntBASIC22.13■■□□□ 1.13
VPS33BQ9H267 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC22.13■■□□□ 1.13
VPS33BQ9H267 NMU-202ENST00000505262 693 ntTSL 3 BASIC22.13■■□□□ 1.13
VPS33BQ9H267 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC22.13■■□□□ 1.13
VPS33BQ9H267 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC22.13■■□□□ 1.13
VPS33BQ9H267 PNMT-203ENST00000581428 677 ntTSL 2 BASIC22.13■■□□□ 1.13
VPS33BQ9H267 AL356488.2-201ENST00000602755 427 ntBASIC22.13■■□□□ 1.13
VPS33BQ9H267 Z83851.2-201ENST00000609564 659 ntBASIC22.13■■□□□ 1.13
VPS33BQ9H267 AC055717.3-201ENST00000622967 595 ntBASIC22.13■■□□□ 1.13
VPS33BQ9H267 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS33BQ9H267 AC125437.2-201ENST00000625180 2167 ntBASIC22.13■■□□□ 1.13
VPS33BQ9H267 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS33BQ9H267 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
VPS33BQ9H267 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
VPS33BQ9H267 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS33BQ9H267 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS33BQ9H267 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS33BQ9H267 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS33BQ9H267 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
VPS33BQ9H267 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
VPS33BQ9H267 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS33BQ9H267 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VPS33BQ9H267 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS33BQ9H267 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS33BQ9H267 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC22.12■■□□□ 1.13
VPS33BQ9H267 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VPS33BQ9H267 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
VPS33BQ9H267 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
VPS33BQ9H267 FUOM-202ENST00000368551 628 ntTSL 3 BASIC22.12■■□□□ 1.13
VPS33BQ9H267 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS33BQ9H267 RPS2P1-201ENST00000434010 821 ntBASIC22.12■■□□□ 1.13
VPS33BQ9H267 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS33BQ9H267 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC22.12■■□□□ 1.13
VPS33BQ9H267 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC22.12■■□□□ 1.13
VPS33BQ9H267 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VPS33BQ9H267 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS33BQ9H267 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
VPS33BQ9H267 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.12■■□□□ 1.13
VPS33BQ9H267 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS33BQ9H267 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS33BQ9H267 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS33BQ9H267 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms