Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 ACTG1P14-201ENST00000446382 1122 ntBASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 CR383656.12-201ENST00000549567 513 ntBASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 AC006557.2-201ENST00000592985 1240 ntBASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 PKD1P6-201ENST00000343738 4769 ntBASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 AC136632.2-201ENST00000512891 861 ntBASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 DUX4L27-201ENST00000554796 1261 ntBASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 AC007225.1-201ENST00000566331 1836 ntBASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN3Q9BTN0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 AC068472.1-201ENST00000474589 881 ntBASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 LINC00628-201ENST00000628516 1289 ntBASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 AL513210.1-201ENST00000629608 234 ntBASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 AC006333.2-201ENST00000607957 2099 ntBASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LRFN3Q9BTN0 AC034236.2-201ENST00000606662 1610 ntBASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 AC004461.1-201ENST00000412461 403 ntBASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.34■□□□□ 0.53
LRFN3Q9BTN0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRFN3Q9BTN0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.33■□□□□ 0.53
LRFN3Q9BTN0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
LRFN3Q9BTN0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRFN3Q9BTN0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms