Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 AC026271.3-201ENST00000571884 352 ntBASIC16.84■□□□□ 0.29
SNX18Q96RF0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 AL356309.3-201ENST00000624132 1934 ntBASIC16.84■□□□□ 0.29
SNX18Q96RF0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
SNX18Q96RF0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SNX18Q96RF0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.83■□□□□ 0.28
SNX18Q96RF0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SNX18Q96RF0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX18Q96RF0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
SNX18Q96RF0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX18Q96RF0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 AP002982.1-201ENST00000492365 877 ntBASIC16.83■□□□□ 0.28
SNX18Q96RF0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX18Q96RF0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX18Q96RF0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX18Q96RF0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SNX18Q96RF0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.83■□□□□ 0.28
SNX18Q96RF0 HTR7P1-202ENST00000624664 4411 ntBASIC16.83■□□□□ 0.28
SNX18Q96RF0 AC068587.9-201ENST00000641814 219 ntBASIC16.83■□□□□ 0.28
SNX18Q96RF0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX18Q96RF0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SNX18Q96RF0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX18Q96RF0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX18Q96RF0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX18Q96RF0 AC073592.3-201ENST00000625118 1834 ntBASIC16.82■□□□□ 0.28
SNX18Q96RF0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX18Q96RF0 KRT8P32-201ENST00000512863 1461 ntBASIC16.82■□□□□ 0.28
SNX18Q96RF0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX18Q96RF0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX18Q96RF0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX18Q96RF0 AC046158.3-201ENST00000624947 2558 ntBASIC16.82■□□□□ 0.28
SNX18Q96RF0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX18Q96RF0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX18Q96RF0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX18Q96RF0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SNX18Q96RF0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX18Q96RF0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SNX18Q96RF0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX18Q96RF0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX18Q96RF0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX18Q96RF0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX18Q96RF0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX18Q96RF0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX18Q96RF0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms