Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.64■□□□□ 0.09
SPG11Q96JI7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPG11Q96JI7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.64■□□□□ 0.09
SPG11Q96JI7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPG11Q96JI7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.64■□□□□ 0.09
SPG11Q96JI7 AL591424.1-201ENST00000442569 1213 ntBASIC15.64■□□□□ 0.09
SPG11Q96JI7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPG11Q96JI7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPG11Q96JI7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPG11Q96JI7 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.64■□□□□ 0.09
SPG11Q96JI7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.64■□□□□ 0.09
SPG11Q96JI7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPG11Q96JI7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPG11Q96JI7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.64■□□□□ 0.09
SPG11Q96JI7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPG11Q96JI7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPG11Q96JI7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPG11Q96JI7 DNAJB3-202ENST00000449667 1266 ntBASIC15.64■□□□□ 0.09
SPG11Q96JI7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
SPG11Q96JI7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPG11Q96JI7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPG11Q96JI7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPG11Q96JI7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPG11Q96JI7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPG11Q96JI7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 AP001269.4-201ENST00000609611 512 ntBASIC15.63■□□□□ 0.09
SPG11Q96JI7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPG11Q96JI7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPG11Q96JI7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPG11Q96JI7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPG11Q96JI7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SPG11Q96JI7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPG11Q96JI7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SPG11Q96JI7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPG11Q96JI7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 AC005336.2-201ENST00000593183 939 ntBASIC15.63■□□□□ 0.09
SPG11Q96JI7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.63■□□□□ 0.09
SPG11Q96JI7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPG11Q96JI7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SPG11Q96JI7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SPG11Q96JI7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPG11Q96JI7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SPG11Q96JI7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPG11Q96JI7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPG11Q96JI7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.62■□□□□ 0.09
SPG11Q96JI7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.62■□□□□ 0.09
SPG11Q96JI7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.62■□□□□ 0.09
SPG11Q96JI7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.62■□□□□ 0.09
SPG11Q96JI7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.62■□□□□ 0.09
SPG11Q96JI7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.62■□□□□ 0.09
SPG11Q96JI7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SPG11Q96JI7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SPG11Q96JI7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPG11Q96JI7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPG11Q96JI7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SPG11Q96JI7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPG11Q96JI7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPG11Q96JI7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.62■□□□□ 0.09
SPG11Q96JI7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
SPG11Q96JI7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.62■□□□□ 0.09
SPG11Q96JI7 AC034105.1-201ENST00000563488 319 ntBASIC15.62■□□□□ 0.09
SPG11Q96JI7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SPG11Q96JI7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SPG11Q96JI7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SPG11Q96JI7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SPG11Q96JI7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.61■□□□□ 0.09
SPG11Q96JI7 TCF3P1-201ENST00000423021 1937 ntBASIC15.61■□□□□ 0.09
SPG11Q96JI7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.61■□□□□ 0.09
SPG11Q96JI7 AC023274.1-201ENST00000418278 595 ntBASIC15.61■□□□□ 0.09
SPG11Q96JI7 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.61■□□□□ 0.09
SPG11Q96JI7 DNAJB3-201ENST00000446806 729 ntBASIC15.61■□□□□ 0.09
SPG11Q96JI7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.61■□□□□ 0.09
SPG11Q96JI7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.61■□□□□ 0.09
SPG11Q96JI7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.61■□□□□ 0.09
SPG11Q96JI7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPG11Q96JI7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms