Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 SCARNA2-201ENST00000458748 420 ntBASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 PGAM5P1-201ENST00000518923 814 ntBASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 AL049840.3-201ENST00000602669 611 ntBASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 AC140113.2-201ENST00000604370 208 ntBASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 PMS2P2-201ENST00000425039 1128 ntBASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 LINC02084-201ENST00000606069 1096 ntBASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 AL139424.1-201ENST00000607572 797 ntBASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNIP1Q8TAD8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 AL512408.1-201ENST00000569378 2000 ntBASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 RPS2P28-201ENST00000314255 741 ntBASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 MIR564-202ENST00000385049 94 ntBASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 AC096582.2-201ENST00000510860 516 ntBASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 AC145285.3-201ENST00000564603 959 ntBASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 AL355877.3-201ENST00000622820 899 ntBASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 AL512353.2-201ENST00000448759 1962 ntBASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SNIP1Q8TAD8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SNIP1Q8TAD8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms