Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 RBM17P1-201ENST00000453646 1190 ntBASIC17.11■□□□□ 0.33
VRK2Q86Y07 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VRK2Q86Y07 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 AP005242.2-201ENST00000580065 1175 ntBASIC17.11■□□□□ 0.33
VRK2Q86Y07 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 TMEM191A-211ENST00000637163 1067 ntBASIC17.11■□□□□ 0.33
VRK2Q86Y07 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VRK2Q86Y07 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VRK2Q86Y07 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VRK2Q86Y07 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VRK2Q86Y07 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.1■□□□□ 0.33
VRK2Q86Y07 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VRK2Q86Y07 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.1■□□□□ 0.33
VRK2Q86Y07 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.1■□□□□ 0.33
VRK2Q86Y07 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
VRK2Q86Y07 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VRK2Q86Y07 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VRK2Q86Y07 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.1■□□□□ 0.33
VRK2Q86Y07 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.1■□□□□ 0.33
VRK2Q86Y07 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
VRK2Q86Y07 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VRK2Q86Y07 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VRK2Q86Y07 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
VRK2Q86Y07 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VRK2Q86Y07 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.1■□□□□ 0.33
VRK2Q86Y07 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VRK2Q86Y07 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VRK2Q86Y07 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VRK2Q86Y07 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.1■□□□□ 0.33
VRK2Q86Y07 AC034236.2-201ENST00000606662 1610 ntBASIC17.1■□□□□ 0.33
VRK2Q86Y07 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VRK2Q86Y07 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VRK2Q86Y07 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.1■□□□□ 0.33
VRK2Q86Y07 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VRK2Q86Y07 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VRK2Q86Y07 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VRK2Q86Y07 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VRK2Q86Y07 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VRK2Q86Y07 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.09■□□□□ 0.33
VRK2Q86Y07 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VRK2Q86Y07 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VRK2Q86Y07 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.09■□□□□ 0.33
VRK2Q86Y07 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VRK2Q86Y07 AC026471.1-201ENST00000564629 3026 ntBASIC17.09■□□□□ 0.33
VRK2Q86Y07 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VRK2Q86Y07 UNC93B2-201ENST00000285383 730 ntBASIC17.09■□□□□ 0.33
VRK2Q86Y07 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VRK2Q86Y07 MIR718-201ENST00000390190 70 ntBASIC17.09■□□□□ 0.33
VRK2Q86Y07 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
VRK2Q86Y07 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.09■□□□□ 0.33
VRK2Q86Y07 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.09■□□□□ 0.33
VRK2Q86Y07 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.09■□□□□ 0.33
VRK2Q86Y07 MIR3180-5-201ENST00000583743 153 ntBASIC17.09■□□□□ 0.33
VRK2Q86Y07 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.09■□□□□ 0.33
VRK2Q86Y07 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VRK2Q86Y07 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VRK2Q86Y07 KRT8P50-201ENST00000562022 1438 ntBASIC17.09■□□□□ 0.33
VRK2Q86Y07 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VRK2Q86Y07 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VRK2Q86Y07 AC036111.1-201ENST00000533973 1582 ntBASIC17.09■□□□□ 0.33
VRK2Q86Y07 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VRK2Q86Y07 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.09■□□□□ 0.33
VRK2Q86Y07 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.09■□□□□ 0.33
VRK2Q86Y07 AC093677.2-201ENST00000600169 1863 ntBASIC17.09■□□□□ 0.33
VRK2Q86Y07 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VRK2Q86Y07 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.09■□□□□ 0.33
VRK2Q86Y07 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.09■□□□□ 0.33
VRK2Q86Y07 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.09■□□□□ 0.33
VRK2Q86Y07 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VRK2Q86Y07 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
VRK2Q86Y07 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VRK2Q86Y07 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VRK2Q86Y07 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VRK2Q86Y07 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
VRK2Q86Y07 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VRK2Q86Y07 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VRK2Q86Y07 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
VRK2Q86Y07 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VRK2Q86Y07 NOC2LP2-201ENST00000407594 1944 ntBASIC17.08■□□□□ 0.33
VRK2Q86Y07 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VRK2Q86Y07 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VRK2Q86Y07 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
VRK2Q86Y07 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VRK2Q86Y07 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VRK2Q86Y07 AL390955.1-201ENST00000428694 934 ntBASIC17.08■□□□□ 0.32
VRK2Q86Y07 AP000525.1-201ENST00000608286 694 ntBASIC17.08■□□□□ 0.32
VRK2Q86Y07 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
VRK2Q86Y07 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
VRK2Q86Y07 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VRK2Q86Y07 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms