Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 KRT18P16-201ENST00000510337 1294 ntBASIC11.72□□□□□ -0.53
LINC00575Q6W349 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 KRT18P61-201ENST00000585825 1298 ntBASIC11.72□□□□□ -0.53
LINC00575Q6W349 AC068587.9-201ENST00000641814 219 ntBASIC11.72□□□□□ -0.53
LINC00575Q6W349 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00575Q6W349 NF2-208ENST00000403435 2568 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 NKILA-202ENST00000614771 2598 ntBASIC11.72□□□□□ -0.53
LINC00575Q6W349 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LINC00575Q6W349 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 KRT17P1-201ENST00000399211 1546 ntBASIC11.71□□□□□ -0.53
LINC00575Q6W349 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 KRT8P45-201ENST00000414328 1447 ntBASIC11.71□□□□□ -0.53
LINC00575Q6W349 AC010980.2-201ENST00000587099 1412 ntBASIC11.71□□□□□ -0.53
LINC00575Q6W349 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 TUBB8P6-201ENST00000436895 1288 ntBASIC11.71□□□□□ -0.53
LINC00575Q6W349 TSPY23P-201ENST00000440136 739 ntBASIC11.71□□□□□ -0.53
LINC00575Q6W349 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 MAX-217ENST00000557277 728 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 MNT-208ENST00000575394 606 ntTSL 4 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 SP2-202ENST00000613139 908 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 BID-214ENST00000617586 542 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC00575Q6W349 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00575Q6W349 AC124283.5-201ENST00000624661 1809 ntBASIC11.71□□□□□ -0.54
LINC00575Q6W349 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00575Q6W349 HARS-201ENST00000307633 1780 ntTSL 2 BASIC11.71□□□□□ -0.54
LINC00575Q6W349 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC11.71□□□□□ -0.54
LINC00575Q6W349 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00575Q6W349 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00575Q6W349 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00575Q6W349 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00575Q6W349 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00575Q6W349 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00575Q6W349 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00575Q6W349 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC11.71□□□□□ -0.54
LINC00575Q6W349 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00575Q6W349 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00575Q6W349 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LINC00575Q6W349 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00575Q6W349 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
LINC00575Q6W349 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00575Q6W349 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00575Q6W349 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00575Q6W349 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00575Q6W349 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00575Q6W349 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00575Q6W349 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00575Q6W349 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00575Q6W349 PP12613-201ENST00000424958 2230 ntBASIC11.7□□□□□ -0.54
LINC00575Q6W349 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00575Q6W349 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00575Q6W349 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00575Q6W349 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms