Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF220Q5VTB9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF220Q5VTB9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF220Q5VTB9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF220Q5VTB9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF220Q5VTB9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF220Q5VTB9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.82■□□□□ 0.44
RNF220Q5VTB9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF220Q5VTB9 AL356309.3-201ENST00000624132 1934 ntBASIC17.82■□□□□ 0.44
RNF220Q5VTB9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF220Q5VTB9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF220Q5VTB9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF220Q5VTB9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF220Q5VTB9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF220Q5VTB9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 ID1-201ENST00000376105 1233 ntBASIC17.81■□□□□ 0.44
RNF220Q5VTB9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RNF220Q5VTB9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF220Q5VTB9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 PRKY-204ENST00000533551 1019 ntBASIC17.79■□□□□ 0.44
RNF220Q5VTB9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 AC008403.3-201ENST00000598924 454 ntBASIC17.79■□□□□ 0.44
RNF220Q5VTB9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms