Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 AC008556.1-201ENST00000610908 2040 ntBASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL13A1Q5TAT6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 AL121761.2-201ENST00000598007 1648 ntBASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 AC009237.14-201ENST00000609975 1594 ntBASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 AC074386.1-202ENST00000463561 864 ntBASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 SERBP1P5-201ENST00000510079 1181 ntBASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 AL390754.1-201ENST00000619088 582 ntBASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 AC009093.7-201ENST00000623853 1223 ntBASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL13A1Q5TAT6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COL13A1Q5TAT6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COL13A1Q5TAT6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.64■□□□□ 0.89
COL13A1Q5TAT6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL13A1Q5TAT6 FO538757.1-201ENST00000623083 1397 ntBASIC20.64■□□□□ 0.89
COL13A1Q5TAT6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL13A1Q5TAT6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL13A1Q5TAT6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL13A1Q5TAT6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL13A1Q5TAT6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL13A1Q5TAT6 BCYRN1-201ENST00000418539 200 ntBASIC20.64■□□□□ 0.89
COL13A1Q5TAT6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL13A1Q5TAT6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.64■□□□□ 0.89
COL13A1Q5TAT6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.64■□□□□ 0.89
COL13A1Q5TAT6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.64■□□□□ 0.89
COL13A1Q5TAT6 AL022326.1-202ENST00000641533 845 ntBASIC20.64■□□□□ 0.89
COL13A1Q5TAT6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
COL13A1Q5TAT6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL13A1Q5TAT6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 TUBB3P1-201ENST00000405796 1332 ntBASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 IGLL3P-201ENST00000412472 434 ntBASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms