Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.35■□□□□ 0.85
PMS1P54277 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PMS1P54277 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PMS1P54277 KRT8P9-201ENST00000558927 1449 ntBASIC20.35■□□□□ 0.85
PMS1P54277 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PMS1P54277 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 SDHAP2-201ENST00000455183 2001 ntBASIC20.34■□□□□ 0.85
PMS1P54277 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.34■□□□□ 0.85
PMS1P54277 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PMS1P54277 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PMS1P54277 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PMS1P54277 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PMS1P54277 SLC25A1P2-201ENST00000430693 912 ntBASIC20.34■□□□□ 0.85
PMS1P54277 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.34■□□□□ 0.85
PMS1P54277 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.34■□□□□ 0.85
PMS1P54277 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS1P54277 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS1P54277 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS1P54277 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PMS1P54277 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS1P54277 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS1P54277 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS1P54277 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMS1P54277 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PMS1P54277 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PMS1P54277 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMS1P54277 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PMS1P54277 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMS1P54277 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMS1P54277 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMS1P54277 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMS1P54277 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMS1P54277 AP000593.1-201ENST00000393668 712 ntBASIC20.33■□□□□ 0.85
PMS1P54277 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.33■□□□□ 0.85
PMS1P54277 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.33■□□□□ 0.85
PMS1P54277 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.33■□□□□ 0.85
PMS1P54277 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.33■□□□□ 0.85
PMS1P54277 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.33■□□□□ 0.85
PMS1P54277 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMS1P54277 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.33■□□□□ 0.85
PMS1P54277 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMS1P54277 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
PMS1P54277 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMS1P54277 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PMS1P54277 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PMS1P54277 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PMS1P54277 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.33■□□□□ 0.84
PMS1P54277 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PMS1P54277 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
PMS1P54277 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PMS1P54277 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
PMS1P54277 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PMS1P54277 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMS1P54277 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PMS1P54277 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PMS1P54277 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PMS1P54277 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMS1P54277 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.32■□□□□ 0.84
PMS1P54277 AC007663.1-201ENST00000438948 1240 ntBASIC20.32■□□□□ 0.84
PMS1P54277 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.32■□□□□ 0.84
PMS1P54277 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.32■□□□□ 0.84
PMS1P54277 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMS1P54277 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.32■□□□□ 0.84
PMS1P54277 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PMS1P54277 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PMS1P54277 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.32■□□□□ 0.84
PMS1P54277 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMS1P54277 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMS1P54277 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMS1P54277 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.32■□□□□ 0.84
PMS1P54277 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PMS1P54277 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.32■□□□□ 0.84
PMS1P54277 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PMS1P54277 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.31■□□□□ 0.84
PMS1P54277 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMS1P54277 CYP2D8P-201ENST00000433633 1490 ntBASIC20.31■□□□□ 0.84
PMS1P54277 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PMS1P54277 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PMS1P54277 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMS1P54277 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.31■□□□□ 0.84
PMS1P54277 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PMS1P54277 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PMS1P54277 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMS1P54277 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMS1P54277 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PMS1P54277 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.31■□□□□ 0.84
PMS1P54277 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.31■□□□□ 0.84
PMS1P54277 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PMS1P54277 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PMS1P54277 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PMS1P54277 AL163051.1-201ENST00000569214 1512 ntBASIC20.31■□□□□ 0.84
PMS1P54277 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMS1P54277 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms