Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CLCN4P51793 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCN4P51793 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CLCN4P51793 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN4P51793 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CLCN4P51793 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCN4P51793 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CLCN4P51793 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCN4P51793 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN4P51793 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CLCN4P51793 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN4P51793 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CLCN4P51793 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN4P51793 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN4P51793 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CLCN4P51793 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN4P51793 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN4P51793 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN4P51793 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN4P51793 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN4P51793 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN4P51793 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCN4P51793 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN4P51793 HEIH-201ENST00000623091 1652 ntBASIC19.41■□□□□ 0.7
CLCN4P51793 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CLCN4P51793 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCN4P51793 MINOS1P3-201ENST00000457048 203 ntBASIC19.41■□□□□ 0.7
CLCN4P51793 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN4P51793 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.41■□□□□ 0.7
CLCN4P51793 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCN4P51793 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.41■□□□□ 0.7
CLCN4P51793 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCN4P51793 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN4P51793 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCN4P51793 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN4P51793 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN4P51793 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCN4P51793 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN4P51793 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN4P51793 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCN4P51793 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLCN4P51793 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CLCN4P51793 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.4■□□□□ 0.7
CLCN4P51793 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.4■□□□□ 0.7
CLCN4P51793 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCN4P51793 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CLCN4P51793 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.4■□□□□ 0.7
CLCN4P51793 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CLCN4P51793 GPALPP1-207ENST00000611650 899 ntBASIC19.4■□□□□ 0.7
CLCN4P51793 BX640515.1-201ENST00000617215 977 ntBASIC19.4■□□□□ 0.7
CLCN4P51793 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCN4P51793 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CLCN4P51793 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CLCN4P51793 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN4P51793 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CLCN4P51793 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLCN4P51793 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLCN4P51793 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLCN4P51793 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.39■□□□□ 0.69
CLCN4P51793 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLCN4P51793 AC093484.2-201ENST00000580996 2166 ntBASIC19.39■□□□□ 0.69
CLCN4P51793 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLCN4P51793 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN4P51793 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN4P51793 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN4P51793 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLCN4P51793 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN4P51793 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN4P51793 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCN4P51793 POM121L3P-201ENST00000419331 1163 ntBASIC19.39■□□□□ 0.69
CLCN4P51793 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.39■□□□□ 0.69
CLCN4P51793 AC120114.3-201ENST00000611923 658 ntBASIC19.39■□□□□ 0.69
CLCN4P51793 AC006538.3-201ENST00000612495 578 ntBASIC19.39■□□□□ 0.69
CLCN4P51793 TP73-AS1-207ENST00000624167 988 ntBASIC19.39■□□□□ 0.69
CLCN4P51793 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CLCN4P51793 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN4P51793 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.39■□□□□ 0.69
CLCN4P51793 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCN4P51793 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN4P51793 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.39■□□□□ 0.69
CLCN4P51793 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.39■□□□□ 0.69
CLCN4P51793 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN4P51793 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms