Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CKS2P33552 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.61□□□□□ -0.23
CKS2P33552 TSPY21P-201ENST00000433481 731 ntBASIC13.61□□□□□ -0.23
CKS2P33552 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.61□□□□□ -0.23
CKS2P33552 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC13.61□□□□□ -0.23
CKS2P33552 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.61□□□□□ -0.23
CKS2P33552 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.61□□□□□ -0.23
CKS2P33552 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 AC068338.2-201ENST00000563278 1430 ntBASIC13.61□□□□□ -0.23
CKS2P33552 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CKS2P33552 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CKS2P33552 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CKS2P33552 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CKS2P33552 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.61□□□□□ -0.23
CKS2P33552 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.61□□□□□ -0.23
CKS2P33552 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.61□□□□□ -0.23
CKS2P33552 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.6□□□□□ -0.23
CKS2P33552 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.6□□□□□ -0.23
CKS2P33552 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CKS2P33552 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 HEIH-201ENST00000623091 1652 ntBASIC13.6□□□□□ -0.23
CKS2P33552 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
CKS2P33552 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CKS2P33552 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.6□□□□□ -0.23
CKS2P33552 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CKS2P33552 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 KRT18P11-201ENST00000435214 1283 ntBASIC13.6□□□□□ -0.23
CKS2P33552 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.6□□□□□ -0.23
CKS2P33552 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.6□□□□□ -0.23
CKS2P33552 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CKS2P33552 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.6□□□□□ -0.23
CKS2P33552 AL499627.1-201ENST00000569373 2188 ntBASIC13.6□□□□□ -0.23
CKS2P33552 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 RALB-208ENST00000631312 311 ntTSL 5 BASIC13.6□□□□□ -0.23
CKS2P33552 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CKS2P33552 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CKS2P33552 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.6□□□□□ -0.23
CKS2P33552 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CKS2P33552 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
CKS2P33552 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CKS2P33552 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.59□□□□□ -0.23
CKS2P33552 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CKS2P33552 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.59□□□□□ -0.23
CKS2P33552 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.59□□□□□ -0.23
CKS2P33552 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CKS2P33552 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.59□□□□□ -0.23
CKS2P33552 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CKS2P33552 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CKS2P33552 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CKS2P33552 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.59□□□□□ -0.23
CKS2P33552 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.59□□□□□ -0.23
CKS2P33552 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
CKS2P33552 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 AC093677.2-201ENST00000600169 1863 ntBASIC13.59□□□□□ -0.23
CKS2P33552 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms