Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.42■□□□□ 0.22
CTLA4P16410 AC093677.2-201ENST00000600169 1863 ntBASIC16.42■□□□□ 0.22
CTLA4P16410 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
CTLA4P16410 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTLA4P16410 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTLA4P16410 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTLA4P16410 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.42■□□□□ 0.22
CTLA4P16410 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.42■□□□□ 0.22
CTLA4P16410 SLC25A1P2-201ENST00000430693 912 ntBASIC16.42■□□□□ 0.22
CTLA4P16410 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.42■□□□□ 0.22
CTLA4P16410 AP003041.3-201ENST00000527151 707 ntBASIC16.42■□□□□ 0.22
CTLA4P16410 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.42■□□□□ 0.22
CTLA4P16410 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CTLA4P16410 FITM1-202ENST00000559294 800 ntBASIC16.42■□□□□ 0.22
CTLA4P16410 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTLA4P16410 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTLA4P16410 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.42■□□□□ 0.22
CTLA4P16410 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTLA4P16410 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
CTLA4P16410 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTLA4P16410 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTLA4P16410 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTLA4P16410 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTLA4P16410 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTLA4P16410 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTLA4P16410 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTLA4P16410 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTLA4P16410 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.41■□□□□ 0.22
CTLA4P16410 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTLA4P16410 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.41■□□□□ 0.22
CTLA4P16410 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTLA4P16410 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CTLA4P16410 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.41■□□□□ 0.22
CTLA4P16410 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTLA4P16410 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.41■□□□□ 0.22
CTLA4P16410 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.41■□□□□ 0.22
CTLA4P16410 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.41■□□□□ 0.22
CTLA4P16410 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.41■□□□□ 0.22
CTLA4P16410 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTLA4P16410 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.41■□□□□ 0.22
CTLA4P16410 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CTLA4P16410 AL353719.1-201ENST00000566847 864 ntBASIC16.41■□□□□ 0.22
CTLA4P16410 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTLA4P16410 AP006294.2-201ENST00000641667 209 ntBASIC16.41■□□□□ 0.22
CTLA4P16410 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.41■□□□□ 0.22
CTLA4P16410 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTLA4P16410 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.41■□□□□ 0.22
CTLA4P16410 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTLA4P16410 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.41■□□□□ 0.22
CTLA4P16410 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTLA4P16410 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTLA4P16410 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.41■□□□□ 0.22
CTLA4P16410 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTLA4P16410 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.4■□□□□ 0.22
CTLA4P16410 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTLA4P16410 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
CTLA4P16410 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTLA4P16410 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTLA4P16410 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.4■□□□□ 0.22
CTLA4P16410 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CTLA4P16410 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CTLA4P16410 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTLA4P16410 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CTLA4P16410 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTLA4P16410 MIR1238-201ENST00000408483 83 ntBASIC16.4■□□□□ 0.22
CTLA4P16410 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.4■□□□□ 0.22
CTLA4P16410 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.4■□□□□ 0.22
CTLA4P16410 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.4■□□□□ 0.22
CTLA4P16410 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.4■□□□□ 0.22
CTLA4P16410 AL355075.4-201ENST00000554988 638 ntBASIC16.4■□□□□ 0.22
CTLA4P16410 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.4■□□□□ 0.22
CTLA4P16410 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.4■□□□□ 0.22
CTLA4P16410 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTLA4P16410 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTLA4P16410 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTLA4P16410 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTLA4P16410 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CTLA4P16410 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTLA4P16410 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTLA4P16410 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTLA4P16410 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTLA4P16410 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.4■□□□□ 0.22
CTLA4P16410 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTLA4P16410 AC005332.8-201ENST00000622750 2735 ntBASIC16.39■□□□□ 0.22
CTLA4P16410 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.39■□□□□ 0.22
CTLA4P16410 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.39■□□□□ 0.21
CTLA4P16410 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTLA4P16410 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTLA4P16410 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.39■□□□□ 0.21
CTLA4P16410 NOC2LP2-201ENST00000407594 1944 ntBASIC16.39■□□□□ 0.21
CTLA4P16410 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTLA4P16410 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTLA4P16410 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CTLA4P16410 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTLA4P16410 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTLA4P16410 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.39■□□□□ 0.21
CTLA4P16410 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.39■□□□□ 0.21
CTLA4P16410 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTLA4P16410 AC092338.2-201ENST00000568827 1415 ntBASIC16.39■□□□□ 0.21
CTLA4P16410 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms