Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.67■□□□□ 0.9
RARBP10826 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.67■□□□□ 0.9
RARBP10826 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.67■□□□□ 0.9
RARBP10826 AC068587.9-201ENST00000641814 219 ntBASIC20.67■□□□□ 0.9
RARBP10826 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RARBP10826 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RARBP10826 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.67■□□□□ 0.9
RARBP10826 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RARBP10826 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RARBP10826 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.67■□□□□ 0.9
RARBP10826 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RARBP10826 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RARBP10826 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RARBP10826 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RARBP10826 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RARBP10826 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RARBP10826 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RARBP10826 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RARBP10826 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.66■□□□□ 0.9
RARBP10826 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
RARBP10826 AL031284.1-201ENST00000419297 478 ntBASIC20.66■□□□□ 0.9
RARBP10826 KRT18P67-201ENST00000432816 1264 ntBASIC20.66■□□□□ 0.9
RARBP10826 AF186996.4-201ENST00000467186 377 ntBASIC20.66■□□□□ 0.9
RARBP10826 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.66■□□□□ 0.9
RARBP10826 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.66■□□□□ 0.9
RARBP10826 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.66■□□□□ 0.9
RARBP10826 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.66■□□□□ 0.9
RARBP10826 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.66■□□□□ 0.9
RARBP10826 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.66■□□□□ 0.9
RARBP10826 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.66■□□□□ 0.9
RARBP10826 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RARBP10826 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RARBP10826 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RARBP10826 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.66■□□□□ 0.9
RARBP10826 FP475955.4-201ENST00000623131 1990 ntBASIC20.66■□□□□ 0.9
RARBP10826 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.66■□□□□ 0.9
RARBP10826 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RARBP10826 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RARBP10826 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RARBP10826 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RARBP10826 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RARBP10826 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.65■□□□□ 0.9
RARBP10826 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RARBP10826 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RARBP10826 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RARBP10826 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.65■□□□□ 0.9
RARBP10826 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RARBP10826 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
RARBP10826 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RARBP10826 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.65■□□□□ 0.9
RARBP10826 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.65■□□□□ 0.9
RARBP10826 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RARBP10826 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RARBP10826 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.65■□□□□ 0.9
RARBP10826 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.65■□□□□ 0.9
RARBP10826 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.65■□□□□ 0.9
RARBP10826 MIR5100-201ENST00000579544 119 ntBASIC20.65■□□□□ 0.9
RARBP10826 BNIP3P18-201ENST00000593976 575 ntBASIC20.65■□□□□ 0.9
RARBP10826 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RARBP10826 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RARBP10826 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RARBP10826 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.65■□□□□ 0.9
RARBP10826 Z98044.1-201ENST00000632503 1764 ntBASIC20.64■□□□□ 0.9
RARBP10826 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RARBP10826 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RARBP10826 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RARBP10826 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.64■□□□□ 0.9
RARBP10826 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RARBP10826 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RARBP10826 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RARBP10826 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RARBP10826 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.64■□□□□ 0.89
RARBP10826 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.64■□□□□ 0.89
RARBP10826 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.64■□□□□ 0.89
RARBP10826 AC093909.1-201ENST00000504731 1122 ntBASIC20.64■□□□□ 0.89
RARBP10826 AC096582.2-201ENST00000510860 516 ntBASIC20.64■□□□□ 0.89
RARBP10826 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.64■□□□□ 0.89
RARBP10826 SLC25A1P1-201ENST00000528351 927 ntBASIC20.64■□□□□ 0.89
RARBP10826 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.64■□□□□ 0.89
RARBP10826 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RARBP10826 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RARBP10826 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARBP10826 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RARBP10826 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARBP10826 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARBP10826 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RARBP10826 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARBP10826 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.63■□□□□ 0.89
RARBP10826 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARBP10826 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARBP10826 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.63■□□□□ 0.89
RARBP10826 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
RARBP10826 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.63■□□□□ 0.89
RARBP10826 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.63■□□□□ 0.89
RARBP10826 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.63■□□□□ 0.89
RARBP10826 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RARBP10826 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RARBP10826 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.63■□□□□ 0.89
RARBP10826 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RARBP10826 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms