Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 PRELID1P1-202ENST00000567272 903 ntBASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 AP002414.4-201ENST00000589764 1148 ntBASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB40ALP0C0E4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 AC012313.10-201ENST00000623509 926 ntBASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB40ALP0C0E4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 RNF126P1-202ENST00000569893 925 ntBASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 KRT18P1-202ENST00000452408 1331 ntBASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB40ALP0C0E4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 DRAXINP1-201ENST00000437611 948 ntBASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 NUS1P1-201ENST00000446295 882 ntBASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 AP003733.1-201ENST00000491725 852 ntBASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms