Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.64■□□□□ 0.57
SRPRAP08240 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SRPRAP08240 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRPRAP08240 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRPRAP08240 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRPRAP08240 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.64■□□□□ 0.57
SRPRAP08240 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.64■□□□□ 0.57
SRPRAP08240 AP002414.4-201ENST00000589764 1148 ntBASIC18.64■□□□□ 0.57
SRPRAP08240 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.64■□□□□ 0.57
SRPRAP08240 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.64■□□□□ 0.57
SRPRAP08240 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.64■□□□□ 0.57
SRPRAP08240 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRPRAP08240 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SRPRAP08240 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRPRAP08240 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.64■□□□□ 0.57
SRPRAP08240 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRPRAP08240 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SRPRAP08240 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.64■□□□□ 0.57
SRPRAP08240 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRPRAP08240 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRPRAP08240 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRPRAP08240 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.64■□□□□ 0.57
SRPRAP08240 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRPRAP08240 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.63■□□□□ 0.57
SRPRAP08240 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRPRAP08240 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.63■□□□□ 0.57
SRPRAP08240 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SRPRAP08240 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRPRAP08240 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.63■□□□□ 0.57
SRPRAP08240 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SRPRAP08240 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRPRAP08240 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRPRAP08240 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRPRAP08240 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRPRAP08240 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.63■□□□□ 0.57
SRPRAP08240 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.63■□□□□ 0.57
SRPRAP08240 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.63■□□□□ 0.57
SRPRAP08240 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.63■□□□□ 0.57
SRPRAP08240 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SRPRAP08240 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.63■□□□□ 0.57
SRPRAP08240 CLEC4GP1-201ENST00000596555 870 ntBASIC18.63■□□□□ 0.57
SRPRAP08240 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.63■□□□□ 0.57
SRPRAP08240 KRT18P1-202ENST00000452408 1331 ntBASIC18.63■□□□□ 0.57
SRPRAP08240 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRPRAP08240 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRPRAP08240 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.63■□□□□ 0.57
SRPRAP08240 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRPRAP08240 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SRPRAP08240 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.62■□□□□ 0.57
SRPRAP08240 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SRPRAP08240 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPRAP08240 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPRAP08240 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPRAP08240 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPRAP08240 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.62■□□□□ 0.57
SRPRAP08240 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.62■□□□□ 0.57
SRPRAP08240 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRPRAP08240 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.62■□□□□ 0.57
SRPRAP08240 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.62■□□□□ 0.57
SRPRAP08240 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPRAP08240 KRT126P-201ENST00000549467 1181 ntBASIC18.62■□□□□ 0.57
SRPRAP08240 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SRPRAP08240 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.62■□□□□ 0.57
SRPRAP08240 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.62■□□□□ 0.57
SRPRAP08240 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SRPRAP08240 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.62■□□□□ 0.57
SRPRAP08240 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPRAP08240 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.62■□□□□ 0.57
SRPRAP08240 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.62■□□□□ 0.57
SRPRAP08240 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRPRAP08240 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.62■□□□□ 0.57
SRPRAP08240 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPRAP08240 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SRPRAP08240 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRPRAP08240 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRPRAP08240 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRPRAP08240 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPRAP08240 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.62■□□□□ 0.57
SRPRAP08240 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.62■□□□□ 0.57
SRPRAP08240 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPRAP08240 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.62■□□□□ 0.57
SRPRAP08240 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPRAP08240 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SRPRAP08240 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPRAP08240 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.61■□□□□ 0.57
SRPRAP08240 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
SRPRAP08240 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SRPRAP08240 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPRAP08240 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SRPRAP08240 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPRAP08240 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPRAP08240 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SRPRAP08240 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPRAP08240 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPRAP08240 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SRPRAP08240 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
SRPRAP08240 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPRAP08240 DRAXINP1-201ENST00000437611 948 ntBASIC18.61■□□□□ 0.57
SRPRAP08240 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.61■□□□□ 0.57
SRPRAP08240 DUSP5P1-201ENST00000441325 1139 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms