Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFBP01127 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.53■□□□□ 0.56
PDGFBP01127 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
PDGFBP01127 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFBP01127 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
PDGFBP01127 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFBP01127 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.52■□□□□ 0.56
PDGFBP01127 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFBP01127 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFBP01127 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.52■□□□□ 0.56
PDGFBP01127 AC068472.1-201ENST00000474589 881 ntBASIC18.52■□□□□ 0.56
PDGFBP01127 ALG1L5P-201ENST00000482043 771 ntBASIC18.52■□□□□ 0.56
PDGFBP01127 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.52■□□□□ 0.56
PDGFBP01127 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFBP01127 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.52■□□□□ 0.56
PDGFBP01127 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.52■□□□□ 0.56
PDGFBP01127 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
PDGFBP01127 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDGFBP01127 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDGFBP01127 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.52■□□□□ 0.55
PDGFBP01127 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDGFBP01127 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.51■□□□□ 0.55
PDGFBP01127 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFBP01127 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.51■□□□□ 0.55
PDGFBP01127 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.51■□□□□ 0.55
PDGFBP01127 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.51■□□□□ 0.55
PDGFBP01127 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFBP01127 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PDGFBP01127 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFBP01127 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFBP01127 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFBP01127 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFBP01127 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PDGFBP01127 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.51■□□□□ 0.55
PDGFBP01127 AL645939.2-201ENST00000427340 991 ntBASIC18.51■□□□□ 0.55
PDGFBP01127 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFBP01127 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFBP01127 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.51■□□□□ 0.55
PDGFBP01127 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.51■□□□□ 0.55
PDGFBP01127 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFBP01127 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.51■□□□□ 0.55
PDGFBP01127 AC005829.1-201ENST00000570002 483 ntBASIC18.51■□□□□ 0.55
PDGFBP01127 MIR4469-201ENST00000583919 79 ntBASIC18.51■□□□□ 0.55
PDGFBP01127 NKAPP1-205ENST00000585790 367 ntBASIC18.51■□□□□ 0.55
PDGFBP01127 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.51■□□□□ 0.55
PDGFBP01127 MTDHP4-201ENST00000600287 670 ntBASIC18.51■□□□□ 0.55
PDGFBP01127 AC064836.3-201ENST00000607928 673 ntBASIC18.51■□□□□ 0.55
PDGFBP01127 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.51■□□□□ 0.55
PDGFBP01127 AC107918.4-202ENST00000641623 219 ntBASIC18.51■□□□□ 0.55
PDGFBP01127 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFBP01127 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PDGFBP01127 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFBP01127 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFBP01127 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFBP01127 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.51■□□□□ 0.55
PDGFBP01127 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFBP01127 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFBP01127 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.5■□□□□ 0.55
PDGFBP01127 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.5■□□□□ 0.55
PDGFBP01127 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFBP01127 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.5■□□□□ 0.55
PDGFBP01127 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFBP01127 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFBP01127 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PDGFBP01127 MIR770-201ENST00000390219 98 ntBASIC18.5■□□□□ 0.55
PDGFBP01127 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFBP01127 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.5■□□□□ 0.55
PDGFBP01127 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFBP01127 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.5■□□□□ 0.55
PDGFBP01127 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.5■□□□□ 0.55
PDGFBP01127 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.5■□□□□ 0.55
PDGFBP01127 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PDGFBP01127 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.5■□□□□ 0.55
PDGFBP01127 AC011467.2-201ENST00000598425 242 ntBASIC18.5■□□□□ 0.55
PDGFBP01127 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.5■□□□□ 0.55
PDGFBP01127 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFBP01127 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFBP01127 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
PDGFBP01127 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFBP01127 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFBP01127 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PDGFBP01127 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.49■□□□□ 0.55
PDGFBP01127 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.49■□□□□ 0.55
PDGFBP01127 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PDGFBP01127 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.49■□□□□ 0.55
PDGFBP01127 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.49■□□□□ 0.55
PDGFBP01127 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 KRT18P2-201ENST00000447938 1258 ntBASIC18.49■□□□□ 0.55
PDGFBP01127 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
PDGFBP01127 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.49■□□□□ 0.55
PDGFBP01127 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.49■□□□□ 0.55
PDGFBP01127 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms