Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 KRT16P4-201ENST00000453883 522 ntBASIC18.58■□□□□ 0.56
FOXD2O60548 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.58■□□□□ 0.56
FOXD2O60548 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXD2O60548 AF228730.7-201ENST00000641842 219 ntBASIC18.58■□□□□ 0.56
FOXD2O60548 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXD2O60548 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXD2O60548 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXD2O60548 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
FOXD2O60548 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXD2O60548 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXD2O60548 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
FOXD2O60548 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXD2O60548 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXD2O60548 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXD2O60548 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
FOXD2O60548 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
FOXD2O60548 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
FOXD2O60548 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXD2O60548 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
FOXD2O60548 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXD2O60548 SAPCD2P3-201ENST00000455031 850 ntBASIC18.57■□□□□ 0.56
FOXD2O60548 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXD2O60548 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.57■□□□□ 0.56
FOXD2O60548 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
FOXD2O60548 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXD2O60548 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 AL049812.1-201ENST00000432563 2267 ntBASIC18.57■□□□□ 0.56
FOXD2O60548 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
FOXD2O60548 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXD2O60548 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXD2O60548 FP700111.2-201ENST00000619190 1892 ntBASIC18.56■□□□□ 0.56
FOXD2O60548 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXD2O60548 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.56■□□□□ 0.56
FOXD2O60548 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXD2O60548 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.56■□□□□ 0.56
FOXD2O60548 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXD2O60548 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXD2O60548 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXD2O60548 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXD2O60548 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.56■□□□□ 0.56
FOXD2O60548 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXD2O60548 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXD2O60548 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXD2O60548 AC093909.1-201ENST00000504731 1122 ntBASIC18.56■□□□□ 0.56
FOXD2O60548 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
FOXD2O60548 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.56■□□□□ 0.56
FOXD2O60548 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXD2O60548 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.56■□□□□ 0.56
FOXD2O60548 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.56■□□□□ 0.56
FOXD2O60548 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
FOXD2O60548 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXD2O60548 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXD2O60548 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXD2O60548 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXD2O60548 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.56■□□□□ 0.56
FOXD2O60548 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.56■□□□□ 0.56
FOXD2O60548 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.56■□□□□ 0.56
FOXD2O60548 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXD2O60548 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXD2O60548 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXD2O60548 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXD2O60548 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXD2O60548 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXD2O60548 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
FOXD2O60548 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXD2O60548 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXD2O60548 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXD2O60548 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXD2O60548 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.55■□□□□ 0.56
FOXD2O60548 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
FOXD2O60548 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXD2O60548 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXD2O60548 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXD2O60548 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.55■□□□□ 0.56
FOXD2O60548 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
FOXD2O60548 AC092865.5-201ENST00000545435 363 ntBASIC18.55■□□□□ 0.56
FOXD2O60548 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXD2O60548 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.55■□□□□ 0.56
FOXD2O60548 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
FOXD2O60548 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXD2O60548 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXD2O60548 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXD2O60548 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXD2O60548 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms