Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 AL136038.4-201ENST00000603606 1261 ntBASIC18.88■□□□□ 0.61
SYNCRIPO60506 AL121672.3-201ENST00000608644 468 ntBASIC18.88■□□□□ 0.61
SYNCRIPO60506 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.88■□□□□ 0.61
SYNCRIPO60506 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.88■□□□□ 0.61
SYNCRIPO60506 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNCRIPO60506 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNCRIPO60506 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNCRIPO60506 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SYNCRIPO60506 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNCRIPO60506 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SYNCRIPO60506 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SYNCRIPO60506 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNCRIPO60506 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNCRIPO60506 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SYNCRIPO60506 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SYNCRIPO60506 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.87■□□□□ 0.61
SYNCRIPO60506 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNCRIPO60506 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SYNCRIPO60506 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNCRIPO60506 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNCRIPO60506 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.87■□□□□ 0.61
SYNCRIPO60506 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SYNCRIPO60506 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNCRIPO60506 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNCRIPO60506 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNCRIPO60506 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.87■□□□□ 0.61
SYNCRIPO60506 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNCRIPO60506 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNCRIPO60506 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNCRIPO60506 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.87■□□□□ 0.61
SYNCRIPO60506 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 FP475955.4-201ENST00000623131 1990 ntBASIC18.86■□□□□ 0.61
SYNCRIPO60506 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 MIR564-202ENST00000385049 94 ntBASIC18.86■□□□□ 0.61
SYNCRIPO60506 AL450487.1-201ENST00000426799 995 ntBASIC18.86■□□□□ 0.61
SYNCRIPO60506 DUSP5P1-201ENST00000441325 1139 ntBASIC18.86■□□□□ 0.61
SYNCRIPO60506 TSSC2-201ENST00000450217 709 ntBASIC18.86■□□□□ 0.61
SYNCRIPO60506 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 AC092119.3-201ENST00000612618 583 ntBASIC18.86■□□□□ 0.61
SYNCRIPO60506 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 AC079602.3-201ENST00000623931 403 ntBASIC18.86■□□□□ 0.61
SYNCRIPO60506 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNCRIPO60506 AC141586.3-201ENST00000562166 1838 ntBASIC18.86■□□□□ 0.61
SYNCRIPO60506 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNCRIPO60506 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNCRIPO60506 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNCRIPO60506 AC020763.4-201ENST00000623414 4170 ntBASIC18.85■□□□□ 0.61
SYNCRIPO60506 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNCRIPO60506 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SYNCRIPO60506 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SYNCRIPO60506 AL391807.1-203ENST00000604392 2365 ntBASIC18.85■□□□□ 0.61
SYNCRIPO60506 KRT8P32-201ENST00000512863 1461 ntBASIC18.85■□□□□ 0.61
SYNCRIPO60506 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SYNCRIPO60506 HOXB1-202ENST00000577092 1414 ntBASIC18.85■□□□□ 0.61
SYNCRIPO60506 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNCRIPO60506 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNCRIPO60506 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.85■□□□□ 0.61
SYNCRIPO60506 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNCRIPO60506 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNCRIPO60506 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms