Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.34□□□□□ -0.11
PDE6DO43924 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.34□□□□□ -0.11
PDE6DO43924 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.34□□□□□ -0.11
PDE6DO43924 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
PDE6DO43924 KRT18P14-201ENST00000534205 1250 ntBASIC14.34□□□□□ -0.11
PDE6DO43924 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.34□□□□□ -0.11
PDE6DO43924 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.34□□□□□ -0.11
PDE6DO43924 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.34□□□□□ -0.11
PDE6DO43924 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PDE6DO43924 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.34□□□□□ -0.11
PDE6DO43924 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 RCC2P6-201ENST00000526625 1557 ntBASIC14.34□□□□□ -0.11
PDE6DO43924 AC008556.1-201ENST00000610908 2040 ntBASIC14.34□□□□□ -0.11
PDE6DO43924 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.34□□□□□ -0.11
PDE6DO43924 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDE6DO43924 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.33□□□□□ -0.11
PDE6DO43924 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PDE6DO43924 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PDE6DO43924 KRT8P45-201ENST00000414328 1447 ntBASIC14.33□□□□□ -0.11
PDE6DO43924 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.33□□□□□ -0.11
PDE6DO43924 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDE6DO43924 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDE6DO43924 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.33□□□□□ -0.12
PDE6DO43924 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.33□□□□□ -0.12
PDE6DO43924 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.33□□□□□ -0.12
PDE6DO43924 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.33□□□□□ -0.12
PDE6DO43924 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.33□□□□□ -0.12
PDE6DO43924 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.33□□□□□ -0.12
PDE6DO43924 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.33□□□□□ -0.12
PDE6DO43924 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.33□□□□□ -0.12
PDE6DO43924 AC069236.1-201ENST00000604339 616 ntBASIC14.33□□□□□ -0.12
PDE6DO43924 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PDE6DO43924 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.33□□□□□ -0.12
PDE6DO43924 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.33□□□□□ -0.12
PDE6DO43924 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PDE6DO43924 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.33□□□□□ -0.12
PDE6DO43924 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.33□□□□□ -0.12
PDE6DO43924 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.33□□□□□ -0.12
PDE6DO43924 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.33□□□□□ -0.12
PDE6DO43924 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
PDE6DO43924 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.33□□□□□ -0.12
PDE6DO43924 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDE6DO43924 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.33□□□□□ -0.12
PDE6DO43924 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDE6DO43924 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PDE6DO43924 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDE6DO43924 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDE6DO43924 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDE6DO43924 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PDE6DO43924 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.32□□□□□ -0.12
PDE6DO43924 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 PP12613-201ENST00000424958 2230 ntBASIC14.32□□□□□ -0.12
PDE6DO43924 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDE6DO43924 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PDE6DO43924 AL355472.2-201ENST00000422958 438 ntBASIC14.32□□□□□ -0.12
PDE6DO43924 AC073210.2-201ENST00000430369 194 ntBASIC14.32□□□□□ -0.12
PDE6DO43924 SUDS3P1-201ENST00000505831 966 ntBASIC14.32□□□□□ -0.12
PDE6DO43924 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.32□□□□□ -0.12
PDE6DO43924 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PDE6DO43924 AC068587.9-201ENST00000641814 219 ntBASIC14.32□□□□□ -0.12
PDE6DO43924 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDE6DO43924 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PDE6DO43924 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDE6DO43924 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms