Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MSI1O43347 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSI1O43347 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSI1O43347 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSI1O43347 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSI1O43347 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MSI1O43347 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSI1O43347 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
MSI1O43347 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MSI1O43347 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.17■□□□□ 0.66
MSI1O43347 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.17■□□□□ 0.66
MSI1O43347 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSI1O43347 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
MSI1O43347 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MSI1O43347 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.17■□□□□ 0.66
MSI1O43347 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSI1O43347 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MSI1O43347 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MSI1O43347 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSI1O43347 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSI1O43347 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSI1O43347 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.17■□□□□ 0.66
MSI1O43347 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.17■□□□□ 0.66
MSI1O43347 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MSI1O43347 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSI1O43347 MIR3180-4-201ENST00000582223 153 ntBASIC19.17■□□□□ 0.66
MSI1O43347 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.17■□□□□ 0.66
MSI1O43347 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.17■□□□□ 0.66
MSI1O43347 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
MSI1O43347 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.17■□□□□ 0.66
MSI1O43347 AC005332.1-201ENST00000577698 1310 ntBASIC19.17■□□□□ 0.66
MSI1O43347 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
MSI1O43347 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSI1O43347 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MSI1O43347 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.17■□□□□ 0.66
MSI1O43347 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
MSI1O43347 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSI1O43347 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSI1O43347 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MSI1O43347 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
MSI1O43347 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSI1O43347 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSI1O43347 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
MSI1O43347 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSI1O43347 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MSI1O43347 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSI1O43347 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSI1O43347 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
MSI1O43347 PCED1CP-201ENST00000419887 785 ntBASIC19.16■□□□□ 0.66
MSI1O43347 HLA-F-220ENST00000434407 884 ntBASIC19.16■□□□□ 0.66
MSI1O43347 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MSI1O43347 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.16■□□□□ 0.66
MSI1O43347 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.16■□□□□ 0.66
MSI1O43347 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.16■□□□□ 0.66
MSI1O43347 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.16■□□□□ 0.66
MSI1O43347 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MSI1O43347 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSI1O43347 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSI1O43347 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.16■□□□□ 0.66
MSI1O43347 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.16■□□□□ 0.66
MSI1O43347 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
MSI1O43347 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSI1O43347 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.16■□□□□ 0.66
MSI1O43347 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSI1O43347 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MSI1O43347 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSI1O43347 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSI1O43347 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSI1O43347 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.15■□□□□ 0.66
MSI1O43347 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.15■□□□□ 0.66
MSI1O43347 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSI1O43347 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.15■□□□□ 0.66
MSI1O43347 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSI1O43347 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MSI1O43347 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.15■□□□□ 0.66
MSI1O43347 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.15■□□□□ 0.66
MSI1O43347 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.15■□□□□ 0.66
MSI1O43347 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSI1O43347 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.15■□□□□ 0.66
MSI1O43347 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.15■□□□□ 0.66
MSI1O43347 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.15■□□□□ 0.66
MSI1O43347 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSI1O43347 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.15■□□□□ 0.66
MSI1O43347 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.15■□□□□ 0.66
MSI1O43347 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
MSI1O43347 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MSI1O43347 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSI1O43347 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
MSI1O43347 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
MSI1O43347 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MSI1O43347 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MSI1O43347 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.14■□□□□ 0.65
MSI1O43347 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.14■□□□□ 0.65
MSI1O43347 PVRIG2P-201ENST00000435460 978 ntBASIC19.14■□□□□ 0.65
MSI1O43347 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MSI1O43347 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.14■□□□□ 0.65
MSI1O43347 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.14■□□□□ 0.65
MSI1O43347 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.14■□□□□ 0.65
MSI1O43347 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.14■□□□□ 0.65
MSI1O43347 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms