Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CDX4O14627 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CDX4O14627 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDX4O14627 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDX4O14627 AL356309.3-201ENST00000624132 1934 ntBASIC17.76■□□□□ 0.43
CDX4O14627 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDX4O14627 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDX4O14627 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDX4O14627 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.76■□□□□ 0.43
CDX4O14627 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.76■□□□□ 0.43
CDX4O14627 DNAJB3-202ENST00000449667 1266 ntBASIC17.76■□□□□ 0.43
CDX4O14627 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.76■□□□□ 0.43
CDX4O14627 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.76■□□□□ 0.43
CDX4O14627 AC008735.5-201ENST00000623544 497 ntBASIC17.76■□□□□ 0.43
CDX4O14627 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDX4O14627 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDX4O14627 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.76■□□□□ 0.43
CDX4O14627 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDX4O14627 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.76■□□□□ 0.43
CDX4O14627 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CDX4O14627 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.76■□□□□ 0.43
CDX4O14627 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.76■□□□□ 0.43
CDX4O14627 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDX4O14627 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDX4O14627 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDX4O14627 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
CDX4O14627 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDX4O14627 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDX4O14627 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDX4O14627 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDX4O14627 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.75■□□□□ 0.43
CDX4O14627 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.75■□□□□ 0.43
CDX4O14627 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.75■□□□□ 0.43
CDX4O14627 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.75■□□□□ 0.43
CDX4O14627 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.75■□□□□ 0.43
CDX4O14627 UNC93B6-202ENST00000528242 690 ntBASIC17.75■□□□□ 0.43
CDX4O14627 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.75■□□□□ 0.43
CDX4O14627 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDX4O14627 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDX4O14627 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDX4O14627 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDX4O14627 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDX4O14627 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.75■□□□□ 0.43
CDX4O14627 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDX4O14627 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.75■□□□□ 0.43
CDX4O14627 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDX4O14627 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDX4O14627 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDX4O14627 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDX4O14627 AC112907.3-201ENST00000577781 2400 ntBASIC17.74■□□□□ 0.43
CDX4O14627 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDX4O14627 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDX4O14627 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDX4O14627 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDX4O14627 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDX4O14627 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDX4O14627 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.74■□□□□ 0.43
CDX4O14627 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDX4O14627 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.74■□□□□ 0.43
CDX4O14627 RNA5SP416-201ENST00000516838 111 ntBASIC17.74■□□□□ 0.43
CDX4O14627 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDX4O14627 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.74■□□□□ 0.43
CDX4O14627 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
CDX4O14627 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.74■□□□□ 0.43
CDX4O14627 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDX4O14627 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.74■□□□□ 0.43
CDX4O14627 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CDX4O14627 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDX4O14627 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDX4O14627 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.74■□□□□ 0.43
CDX4O14627 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.74■□□□□ 0.43
CDX4O14627 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDX4O14627 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDX4O14627 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDX4O14627 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDX4O14627 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDX4O14627 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDX4O14627 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDX4O14627 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDX4O14627 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CDX4O14627 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDX4O14627 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDX4O14627 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDX4O14627 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CDX4O14627 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDX4O14627 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.73■□□□□ 0.43
CDX4O14627 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDX4O14627 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.73■□□□□ 0.43
CDX4O14627 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.73■□□□□ 0.43
CDX4O14627 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.73■□□□□ 0.43
CDX4O14627 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.73■□□□□ 0.43
CDX4O14627 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
CDX4O14627 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDX4O14627 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDX4O14627 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.73■□□□□ 0.43
CDX4O14627 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDX4O14627 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDX4O14627 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.73■□□□□ 0.43
CDX4O14627 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.73■□□□□ 0.43
CDX4O14627 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms