Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC112907.2-201ENST00000448639 330 ntBASIC18.6■□□□□ 0.57
TRIM38O00635 VENTXP5-201ENST00000523979 775 ntBASIC18.6■□□□□ 0.57
TRIM38O00635 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM38O00635 GCSHP2-201ENST00000560971 527 ntBASIC18.6■□□□□ 0.57
TRIM38O00635 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM38O00635 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.6■□□□□ 0.57
TRIM38O00635 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM38O00635 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM38O00635 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM38O00635 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRIM38O00635 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
TRIM38O00635 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM38O00635 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM38O00635 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM38O00635 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TRIM38O00635 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
TRIM38O00635 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM38O00635 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM38O00635 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM38O00635 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRIM38O00635 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM38O00635 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM38O00635 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM38O00635 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM38O00635 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM38O00635 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM38O00635 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM38O00635 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM38O00635 AC141586.3-201ENST00000562166 1838 ntBASIC18.59■□□□□ 0.57
TRIM38O00635 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM38O00635 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM38O00635 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.59■□□□□ 0.57
TRIM38O00635 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM38O00635 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM38O00635 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM38O00635 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM38O00635 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM38O00635 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM38O00635 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM38O00635 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM38O00635 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM38O00635 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.59■□□□□ 0.57
TRIM38O00635 AL136038.3-201ENST00000561909 1096 ntBASIC18.59■□□□□ 0.57
TRIM38O00635 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM38O00635 NEK4P2-201ENST00000580004 1012 ntBASIC18.59■□□□□ 0.57
TRIM38O00635 MIR4674-201ENST00000582457 87 ntBASIC18.59■□□□□ 0.57
TRIM38O00635 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM38O00635 HYMAI.1-201ENST00000620949 238 ntBASIC18.59■□□□□ 0.57
TRIM38O00635 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM38O00635 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM38O00635 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM38O00635 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM38O00635 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM38O00635 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM38O00635 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRIM38O00635 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM38O00635 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM38O00635 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
TRIM38O00635 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM38O00635 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.58■□□□□ 0.57
TRIM38O00635 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM38O00635 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM38O00635 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM38O00635 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
TRIM38O00635 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM38O00635 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM38O00635 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM38O00635 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM38O00635 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM38O00635 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM38O00635 DUSP5P1-201ENST00000441325 1139 ntBASIC18.58■□□□□ 0.56
TRIM38O00635 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM38O00635 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM38O00635 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM38O00635 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM38O00635 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.58■□□□□ 0.56
TRIM38O00635 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM38O00635 AC083849.1-201ENST00000615227 514 ntBASIC18.58■□□□□ 0.56
TRIM38O00635 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM38O00635 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.58■□□□□ 0.56
TRIM38O00635 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM38O00635 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM38O00635 WIZP1-201ENST00000531444 2299 ntBASIC18.58■□□□□ 0.56
TRIM38O00635 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM38O00635 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM38O00635 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM38O00635 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM38O00635 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TRIM38O00635 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRIM38O00635 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM38O00635 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM38O00635 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM38O00635 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM38O00635 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM38O00635 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM38O00635 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
TRIM38O00635 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
TRIM38O00635 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM38O00635 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.57■□□□□ 0.56
TRIM38O00635 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms