Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.63■□□□□ 0.41
RTCAO00442 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RTCAO00442 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.63■□□□□ 0.41
RTCAO00442 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.63■□□□□ 0.41
RTCAO00442 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTCAO00442 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.63■□□□□ 0.41
RTCAO00442 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RTCAO00442 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTCAO00442 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.63■□□□□ 0.41
RTCAO00442 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.63■□□□□ 0.41
RTCAO00442 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.63■□□□□ 0.41
RTCAO00442 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.63■□□□□ 0.41
RTCAO00442 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTCAO00442 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTCAO00442 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RTCAO00442 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RTCAO00442 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTCAO00442 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTCAO00442 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTCAO00442 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
RTCAO00442 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.63■□□□□ 0.41
RTCAO00442 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.63■□□□□ 0.41
RTCAO00442 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTCAO00442 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.62■□□□□ 0.41
RTCAO00442 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RTCAO00442 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.62■□□□□ 0.41
RTCAO00442 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.62■□□□□ 0.41
RTCAO00442 AC211429.1-201ENST00000415277 523 ntBASIC17.62■□□□□ 0.41
RTCAO00442 SLC25A3P1-201ENST00000443844 931 ntBASIC17.62■□□□□ 0.41
RTCAO00442 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.62■□□□□ 0.41
RTCAO00442 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.62■□□□□ 0.41
RTCAO00442 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.62■□□□□ 0.41
RTCAO00442 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 AC012306.2-201ENST00000609350 630 ntBASIC17.62■□□□□ 0.41
RTCAO00442 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RTCAO00442 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RTCAO00442 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
RTCAO00442 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTCAO00442 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
RTCAO00442 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RTCAO00442 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RTCAO00442 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.61■□□□□ 0.41
RTCAO00442 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.61■□□□□ 0.41
RTCAO00442 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RTCAO00442 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.61■□□□□ 0.41
RTCAO00442 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.61■□□□□ 0.41
RTCAO00442 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RTCAO00442 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
RTCAO00442 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 AC010203.1-204ENST00000548782 407 ntBASIC17.61■□□□□ 0.41
RTCAO00442 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
RTCAO00442 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RTCAO00442 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RTCAO00442 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RTCAO00442 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RTCAO00442 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
RTCAO00442 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RTCAO00442 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.61■□□□□ 0.41
RTCAO00442 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.61■□□□□ 0.41
RTCAO00442 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.61■□□□□ 0.41
RTCAO00442 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTCAO00442 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.61■□□□□ 0.41
RTCAO00442 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.6■□□□□ 0.41
RTCAO00442 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms