Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXN3O00409 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN3O00409 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
FOXN3O00409 AL163051.1-201ENST00000569214 1512 ntBASIC19.8■□□□□ 0.76
FOXN3O00409 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN3O00409 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.8■□□□□ 0.76
FOXN3O00409 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.8■□□□□ 0.76
FOXN3O00409 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.79■□□□□ 0.76
FOXN3O00409 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.79■□□□□ 0.76
FOXN3O00409 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
FOXN3O00409 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN3O00409 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
FOXN3O00409 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXN3O00409 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.79■□□□□ 0.76
FOXN3O00409 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXN3O00409 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.79■□□□□ 0.76
FOXN3O00409 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
FOXN3O00409 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
FOXN3O00409 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN3O00409 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN3O00409 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN3O00409 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.79■□□□□ 0.76
FOXN3O00409 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.79■□□□□ 0.76
FOXN3O00409 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.79■□□□□ 0.76
FOXN3O00409 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXN3O00409 NAPSB-206ENST00000562112 1266 ntBASIC19.79■□□□□ 0.76
FOXN3O00409 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN3O00409 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN3O00409 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN3O00409 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
FOXN3O00409 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN3O00409 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN3O00409 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN3O00409 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN3O00409 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN3O00409 SDHAP2-201ENST00000455183 2001 ntBASIC19.78■□□□□ 0.76
FOXN3O00409 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN3O00409 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
FOXN3O00409 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN3O00409 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN3O00409 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
FOXN3O00409 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.78■□□□□ 0.76
FOXN3O00409 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
FOXN3O00409 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN3O00409 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN3O00409 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
FOXN3O00409 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.78■□□□□ 0.76
FOXN3O00409 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
FOXN3O00409 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN3O00409 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN3O00409 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.78■□□□□ 0.76
FOXN3O00409 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
FOXN3O00409 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
FOXN3O00409 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN3O00409 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.78■□□□□ 0.76
FOXN3O00409 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN3O00409 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
FOXN3O00409 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN3O00409 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN3O00409 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.78■□□□□ 0.76
FOXN3O00409 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
FOXN3O00409 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
FOXN3O00409 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN3O00409 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXN3O00409 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.77■□□□□ 0.76
FOXN3O00409 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN3O00409 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN3O00409 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXN3O00409 ECEL1P2-202ENST00000465689 757 ntBASIC19.77■□□□□ 0.76
FOXN3O00409 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXN3O00409 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.77■□□□□ 0.76
FOXN3O00409 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
FOXN3O00409 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN3O00409 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN3O00409 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
FOXN3O00409 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN3O00409 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN3O00409 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN3O00409 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXN3O00409 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.77■□□□□ 0.75
FOXN3O00409 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
FOXN3O00409 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
FOXN3O00409 KRT8P7-201ENST00000533003 1432 ntBASIC19.76■□□□□ 0.75
FOXN3O00409 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXN3O00409 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
FOXN3O00409 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXN3O00409 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
FOXN3O00409 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXN3O00409 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXN3O00409 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXN3O00409 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms