Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
O00370 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.71■□□□□ 0.75
O00370 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
O00370 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
O00370 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.71■□□□□ 0.75
O00370 KRT18P23-201ENST00000435622 1283 ntBASIC19.71■□□□□ 0.75
O00370 KRT18P57-201ENST00000443599 1254 ntBASIC19.71■□□□□ 0.75
O00370 ATP5G1P1-201ENST00000448724 379 ntBASIC19.71■□□□□ 0.75
O00370 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.71■□□□□ 0.75
O00370 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.71■□□□□ 0.75
O00370 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
O00370 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
O00370 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
O00370 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
O00370 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
O00370 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
O00370 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
O00370 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
O00370 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
O00370 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.7■□□□□ 0.74
O00370 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
O00370 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
O00370 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.7■□□□□ 0.74
O00370 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.7■□□□□ 0.74
O00370 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
O00370 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
O00370 KRT8P7-201ENST00000533003 1432 ntBASIC19.7■□□□□ 0.74
O00370 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
O00370 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.7■□□□□ 0.74
O00370 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
O00370 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.7■□□□□ 0.74
O00370 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
O00370 RCN1P1-201ENST00000400413 996 ntBASIC19.7■□□□□ 0.74
O00370 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.7■□□□□ 0.74
O00370 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
O00370 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.7■□□□□ 0.74
O00370 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.7■□□□□ 0.74
O00370 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.7■□□□□ 0.74
O00370 AC112497.1-201ENST00000624824 639 ntBASIC19.7■□□□□ 0.74
O00370 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.7■□□□□ 0.74
O00370 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
O00370 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
O00370 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.7■□□□□ 0.74
O00370 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
O00370 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
O00370 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.69■□□□□ 0.74
O00370 AC005332.8-201ENST00000622750 2735 ntBASIC19.69■□□□□ 0.74
O00370 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
O00370 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.69■□□□□ 0.74
O00370 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
O00370 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
O00370 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.69■□□□□ 0.74
O00370 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.69■□□□□ 0.74
O00370 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
O00370 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.69■□□□□ 0.74
O00370 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
O00370 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
O00370 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
O00370 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
O00370 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
O00370 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
O00370 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
O00370 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
O00370 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.68■□□□□ 0.74
O00370 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
O00370 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
O00370 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.68■□□□□ 0.74
O00370 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
O00370 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
O00370 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
O00370 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.68■□□□□ 0.74
O00370 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
O00370 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
O00370 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.68■□□□□ 0.74
O00370 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.68■□□□□ 0.74
O00370 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.68■□□□□ 0.74
O00370 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.68■□□□□ 0.74
O00370 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.68■□□□□ 0.74
O00370 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.68■□□□□ 0.74
O00370 MYC-208ENST00000641036 567 ntBASIC19.68■□□□□ 0.74
O00370 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
O00370 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
O00370 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
O00370 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms