Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC7O00311 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDC7O00311 AC092338.2-201ENST00000568827 1415 ntBASIC18.15■□□□□ 0.5
CDC7O00311 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CDC7O00311 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDC7O00311 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDC7O00311 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC7O00311 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.15■□□□□ 0.5
CDC7O00311 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDC7O00311 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC7O00311 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC7O00311 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC7O00311 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CDC7O00311 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC7O00311 TSPY17P-201ENST00000450329 467 ntBASIC18.15■□□□□ 0.5
CDC7O00311 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.15■□□□□ 0.5
CDC7O00311 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.15■□□□□ 0.5
CDC7O00311 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.15■□□□□ 0.5
CDC7O00311 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.15■□□□□ 0.5
CDC7O00311 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.15■□□□□ 0.5
CDC7O00311 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CDC7O00311 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC7O00311 AC093677.2-201ENST00000600169 1863 ntBASIC18.15■□□□□ 0.5
CDC7O00311 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.15■□□□□ 0.5
CDC7O00311 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.15■□□□□ 0.5
CDC7O00311 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC7O00311 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDC7O00311 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.15■□□□□ 0.5
CDC7O00311 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CDC7O00311 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC7O00311 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CDC7O00311 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CDC7O00311 KRT8P9-201ENST00000558927 1449 ntBASIC18.15■□□□□ 0.5
CDC7O00311 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CDC7O00311 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.14■□□□□ 0.5
CDC7O00311 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.14■□□□□ 0.5
CDC7O00311 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC7O00311 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CDC7O00311 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC7O00311 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC7O00311 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC7O00311 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.14■□□□□ 0.49
CDC7O00311 INGX-201ENST00000359239 846 ntBASIC18.14■□□□□ 0.49
CDC7O00311 AP000593.1-201ENST00000393668 712 ntBASIC18.14■□□□□ 0.49
CDC7O00311 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC7O00311 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.14■□□□□ 0.49
CDC7O00311 AC007663.1-201ENST00000438948 1240 ntBASIC18.14■□□□□ 0.49
CDC7O00311 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.14■□□□□ 0.49
CDC7O00311 CR769767.2-201ENST00000622735 460 ntBASIC18.14■□□□□ 0.49
CDC7O00311 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.14■□□□□ 0.49
CDC7O00311 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC7O00311 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC7O00311 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC7O00311 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CDC7O00311 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDC7O00311 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.14■□□□□ 0.49
CDC7O00311 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.14■□□□□ 0.49
CDC7O00311 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC7O00311 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDC7O00311 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC7O00311 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.13■□□□□ 0.49
CDC7O00311 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
CDC7O00311 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CDC7O00311 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC7O00311 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDC7O00311 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC7O00311 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.13■□□□□ 0.49
CDC7O00311 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC7O00311 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC7O00311 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC7O00311 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.13■□□□□ 0.49
CDC7O00311 CCR12P-201ENST00000446203 998 ntBASIC18.13■□□□□ 0.49
CDC7O00311 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.13■□□□□ 0.49
CDC7O00311 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.13■□□□□ 0.49
CDC7O00311 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.13■□□□□ 0.49
CDC7O00311 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC7O00311 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.13■□□□□ 0.49
CDC7O00311 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC7O00311 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC7O00311 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC7O00311 CYP2D8P-201ENST00000433633 1490 ntBASIC18.13■□□□□ 0.49
CDC7O00311 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.13■□□□□ 0.49
CDC7O00311 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.13■□□□□ 0.49
CDC7O00311 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.13■□□□□ 0.49
CDC7O00311 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC7O00311 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.12■□□□□ 0.49
CDC7O00311 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.12■□□□□ 0.49
CDC7O00311 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CDC7O00311 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CDC7O00311 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC7O00311 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDC7O00311 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDC7O00311 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC7O00311 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.12■□□□□ 0.49
CDC7O00311 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.12■□□□□ 0.49
CDC7O00311 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDC7O00311 BX088651.1-201ENST00000540551 451 ntBASIC18.12■□□□□ 0.49
CDC7O00311 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDC7O00311 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.12■□□□□ 0.49
CDC7O00311 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms