Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19■□□□□ 0.63
DFFAO00273 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
DFFAO00273 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19■□□□□ 0.63
DFFAO00273 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19■□□□□ 0.63
DFFAO00273 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19■□□□□ 0.63
DFFAO00273 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19■□□□□ 0.63
DFFAO00273 AC024243.1-201ENST00000609234 778 ntBASIC19■□□□□ 0.63
DFFAO00273 AL138966.2-201ENST00000621997 464 ntBASIC19■□□□□ 0.63
DFFAO00273 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
DFFAO00273 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19■□□□□ 0.63
DFFAO00273 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19■□□□□ 0.63
DFFAO00273 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DFFAO00273 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DFFAO00273 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DFFAO00273 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DFFAO00273 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19■□□□□ 0.63
DFFAO00273 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
DFFAO00273 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DFFAO00273 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DFFAO00273 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DFFAO00273 AC090340.1-201ENST00000620778 4980 ntBASIC19■□□□□ 0.63
DFFAO00273 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DFFAO00273 CYP51A1P1-201ENST00000492267 1507 ntBASIC19■□□□□ 0.63
DFFAO00273 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19■□□□□ 0.63
DFFAO00273 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19■□□□□ 0.63
DFFAO00273 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DFFAO00273 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.99■□□□□ 0.63
DFFAO00273 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
DFFAO00273 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.99■□□□□ 0.63
DFFAO00273 AC009113.1-201ENST00000570267 2443 ntBASIC18.99■□□□□ 0.63
DFFAO00273 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DFFAO00273 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DFFAO00273 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DFFAO00273 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DFFAO00273 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DFFAO00273 AP000593.1-201ENST00000393668 712 ntBASIC18.99■□□□□ 0.63
DFFAO00273 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DFFAO00273 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.99■□□□□ 0.63
DFFAO00273 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DFFAO00273 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.99■□□□□ 0.63
DFFAO00273 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.99■□□□□ 0.63
DFFAO00273 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.99■□□□□ 0.63
DFFAO00273 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.99■□□□□ 0.63
DFFAO00273 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.99■□□□□ 0.63
DFFAO00273 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.99■□□□□ 0.63
DFFAO00273 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.99■□□□□ 0.63
DFFAO00273 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.99■□□□□ 0.63
DFFAO00273 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
DFFAO00273 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
DFFAO00273 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.99■□□□□ 0.63
DFFAO00273 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DFFAO00273 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DFFAO00273 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.99■□□□□ 0.63
DFFAO00273 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DFFAO00273 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DFFAO00273 HOXB1-202ENST00000577092 1414 ntBASIC18.99■□□□□ 0.63
DFFAO00273 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
DFFAO00273 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.99■□□□□ 0.63
DFFAO00273 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.99■□□□□ 0.63
DFFAO00273 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.99■□□□□ 0.63
DFFAO00273 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.98■□□□□ 0.63
DFFAO00273 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.98■□□□□ 0.63
DFFAO00273 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
DFFAO00273 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.98■□□□□ 0.63
DFFAO00273 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.98■□□□□ 0.63
DFFAO00273 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DFFAO00273 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DFFAO00273 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DFFAO00273 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DFFAO00273 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
DFFAO00273 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DFFAO00273 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.98■□□□□ 0.63
DFFAO00273 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.98■□□□□ 0.63
DFFAO00273 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.98■□□□□ 0.63
DFFAO00273 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DFFAO00273 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DFFAO00273 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.98■□□□□ 0.63
DFFAO00273 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DFFAO00273 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.98■□□□□ 0.63
DFFAO00273 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DFFAO00273 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DFFAO00273 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.98■□□□□ 0.63
DFFAO00273 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.98■□□□□ 0.63
DFFAO00273 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
DFFAO00273 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DFFAO00273 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
DFFAO00273 KRT8P7-201ENST00000533003 1432 ntBASIC18.98■□□□□ 0.63
DFFAO00273 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.98■□□□□ 0.63
DFFAO00273 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
DFFAO00273 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DFFAO00273 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DFFAO00273 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.98■□□□□ 0.63
DFFAO00273 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
DFFAO00273 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
DFFAO00273 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DFFAO00273 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.97■□□□□ 0.63
DFFAO00273 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.97■□□□□ 0.63
DFFAO00273 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DFFAO00273 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DFFAO00273 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms