Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM49BA6NDI0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM49BA6NDI0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 AL355075.4-201ENST00000554988 638 ntBASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRIM49BA6NDI0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 AC008764.6-201ENST00000595909 2069 ntBASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 MIR718-201ENST00000390190 70 ntBASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 TSPY15P-201ENST00000457163 923 ntBASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 MIR4785-201ENST00000585005 73 ntBASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM49BA6NDI0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms