Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL158047.1-201ENST00000445918 881 ntBASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 AC098590.1-201ENST00000468126 897 ntBASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 SLC25A1P4-201ENST00000567977 778 ntBASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 GPAT2P1-201ENST00000444924 1672 ntBASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 AC096733.2-201ENST00000609937 1394 ntBASIC16.77■□□□□ 0.28
TRAV27A0A087WT01 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV27A0A087WT01 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV27A0A087WT01 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV27A0A087WT01 ESPNP-201ENST00000270691 2015 ntBASIC16.77■□□□□ 0.28
TRAV27A0A087WT01 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TRAV27A0A087WT01 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV27A0A087WT01 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV27A0A087WT01 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV27A0A087WT01 AL023284.2-201ENST00000405850 579 ntBASIC16.77■□□□□ 0.28
TRAV27A0A087WT01 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV27A0A087WT01 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV27A0A087WT01 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.77■□□□□ 0.28
TRAV27A0A087WT01 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TRAV27A0A087WT01 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV27A0A087WT01 AC099343.3-201ENST00000605834 2503 ntBASIC16.77■□□□□ 0.28
TRAV27A0A087WT01 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV27A0A087WT01 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.77■□□□□ 0.27
TRAV27A0A087WT01 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
TRAV27A0A087WT01 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TRAV27A0A087WT01 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV27A0A087WT01 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV27A0A087WT01 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV27A0A087WT01 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 AC093677.2-201ENST00000600169 1863 ntBASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 NUDT16P1-203ENST00000513809 620 ntBASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV27A0A087WT01 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 MCCD1P1-208ENST00000445732 328 ntBASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 AC116562.2-201ENST00000507042 360 ntBASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 AC097488.1-201ENST00000507834 756 ntBASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 DGCR10-201ENST00000609839 495 ntBASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms