Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC23.29■■□□□ 1.32
RTCBQ9Y3I0 AP001269.4-201ENST00000609611 512 ntBASIC23.29■■□□□ 1.32
RTCBQ9Y3I0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTCBQ9Y3I0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
RTCBQ9Y3I0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RTCBQ9Y3I0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTCBQ9Y3I0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC23.28■■□□□ 1.32
RTCBQ9Y3I0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTCBQ9Y3I0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RTCBQ9Y3I0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTCBQ9Y3I0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTCBQ9Y3I0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RTCBQ9Y3I0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTCBQ9Y3I0 KRT18P41-201ENST00000518924 1277 ntBASIC23.28■■□□□ 1.32
RTCBQ9Y3I0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC23.28■■□□□ 1.32
RTCBQ9Y3I0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC23.28■■□□□ 1.32
RTCBQ9Y3I0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTCBQ9Y3I0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC23.28■■□□□ 1.32
RTCBQ9Y3I0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTCBQ9Y3I0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTCBQ9Y3I0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 AL157384.1-201ENST00000445995 2473 ntBASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 AC145285.3-201ENST00000564603 959 ntBASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 AC008687.5-201ENST00000593746 558 ntBASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 HEIH-201ENST00000623091 1652 ntBASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTCBQ9Y3I0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 AC068472.1-201ENST00000474589 881 ntBASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 AC009533.2-201ENST00000543664 586 ntBASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 AL691403.2-201ENST00000618460 490 ntBASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTCBQ9Y3I0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 IGHV3-22-201ENST00000520721 359 ntBASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 AC027601.4-201ENST00000611259 610 ntBASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 AC104109.2-201ENST00000602919 1418 ntBASIC23.25■■□□□ 1.31
RTCBQ9Y3I0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.24■■□□□ 1.31
RTCBQ9Y3I0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC23.24■■□□□ 1.31
RTCBQ9Y3I0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTCBQ9Y3I0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC23.24■■□□□ 1.31
RTCBQ9Y3I0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RTCBQ9Y3I0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC23.24■■□□□ 1.31
RTCBQ9Y3I0 CD63-204ENST00000546939 779 ntTSL 3 BASIC23.24■■□□□ 1.31
RTCBQ9Y3I0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RTCBQ9Y3I0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC23.24■■□□□ 1.31
RTCBQ9Y3I0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTCBQ9Y3I0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTCBQ9Y3I0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms