Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 GPX1P1-201ENST00000388829 606 ntBASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 AL390719.1-204ENST00000412397 1219 ntBASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 PP12613-201ENST00000424958 2230 ntBASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 TSPY21P-201ENST00000433481 731 ntBASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.28■□□□□ 0.2
COMMD3Q9UBI1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 AC124283.5-201ENST00000624661 1809 ntBASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 AC008894.3-201ENST00000624324 3103 ntBASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 MYC-208ENST00000641036 567 ntBASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 MTMR9LP-203ENST00000426597 1545 ntBASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD3Q9UBI1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COMMD3Q9UBI1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
COMMD3Q9UBI1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COMMD3Q9UBI1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms