Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 TMEM161A-207ENST00000587915 540 ntTSL 425.55■■□□□ 1.684e-8■■□□□ 13
DROSHAQ9NRR4 TMEM161A-205ENST00000587406 1923 ntTSL 525.49■■□□□ 1.674e-8■■□□□ 13
DROSHAQ9NRR4 WDR1-206ENST00000502962 1411 ntTSL 525.3■■□□□ 1.648e-6■■□□□ 13
DROSHAQ9NRR4 TMEM161A-210ENST00000589448 1799 ntTSL 525.24■■□□□ 1.634e-8■■□□□ 13
DROSHAQ9NRR4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.624e-8■■□□□ 13
DROSHAQ9NRR4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC25.06■■□□□ 1.64e-8■■□□□ 13
DROSHAQ9NRR4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.584e-8■■□□□ 13
DROSHAQ9NRR4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.568e-6■■□□□ 13
DROSHAQ9NRR4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC24.52■■□□□ 1.524e-8■■□□□ 13
DROSHAQ9NRR4 WDR1-207ENST00000504739 555 ntTSL 323.76■■□□□ 1.398e-6■■□□□ 13
DROSHAQ9NRR4 WDR1-210ENST00000506246 572 ntTSL 523.76■■□□□ 1.398e-6■■□□□ 13
DROSHAQ9NRR4 STK24-206ENST00000481288 656 ntTSL 323.69■■□□□ 1.384e-8■■□□□ 13
DROSHAQ9NRR4 ANKRD23-206ENST00000482175 2040 ntTSL 223.47■■□□□ 1.354e-8■■□□□ 13
DROSHAQ9NRR4 STK24-207ENST00000491878 547 ntTSL 422.89■■□□□ 1.254e-8■■□□□ 13
DROSHAQ9NRR4 TMEM161A-203ENST00000586357 482 ntTSL 422.83■■□□□ 1.254e-8■■□□□ 13
DROSHAQ9NRR4 MRPS24-204ENST00000467084 729 ntTSL 222.44■■□□□ 1.184e-8■■□□□ 13
DROSHAQ9NRR4 MTA1-205ENST00000426567 568 ntTSL 322.2■■□□□ 1.144e-8■■□□□ 13
DROSHAQ9NRR4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.094e-8■■□□□ 13
DROSHAQ9NRR4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC21.5■■□□□ 1.034e-8■■□□□ 13
DROSHAQ9NRR4 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.014e-8■■□□□ 13
DROSHAQ9NRR4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 14e-8■■□□□ 13
DROSHAQ9NRR4 TMEM161A-215ENST00000592369 528 ntTSL 321.23■□□□□ 0.994e-8■■□□□ 13
DROSHAQ9NRR4 ANKRD23-205ENST00000476975 1132 ntTSL 521.01■□□□□ 0.954e-8■■□□□ 13
DROSHAQ9NRR4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.84■□□□□ 0.934e-8■■□□□ 13
DROSHAQ9NRR4 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.744e-8■■□□□ 13
DROSHAQ9NRR4 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC19.53■□□□□ 0.728e-6■■□□□ 13
DROSHAQ9NRR4 ANKRD39-202ENST00000443120 4965 ntTSL 218.37■□□□□ 0.534e-8■■□□□ 13
DROSHAQ9NRR4 CD59-205ENST00000437761 758 ntAPPRIS P2 TSL 4 BASIC18.09■□□□□ 0.494e-8■■□□□ 13
DROSHAQ9NRR4 TMEM161A-214ENST00000592147 347 ntTSL 517.66■□□□□ 0.424e-8■■□□□ 13
DROSHAQ9NRR4 CD59-214ENST00000534312 572 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.294e-8■■□□□ 13
DROSHAQ9NRR4 WDR1-218ENST00000515743 4482 ntTSL 516.46■□□□□ 0.238e-6■■□□□ 13
DROSHAQ9NRR4 LINC01004-202ENST00000450686 538 ntTSL 3 BASIC16.15■□□□□ 0.181e-6■■□□□ 13
DROSHAQ9NRR4 CD59-204ENST00000426650 741 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.114e-8■■□□□ 13
DROSHAQ9NRR4 CD59-207ENST00000525763 789 ntTSL 315.75■□□□□ 0.114e-8■■□□□ 13
DROSHAQ9NRR4 CD59-208ENST00000527577 686 ntAPPRIS P2 TSL 3 BASIC15.55■□□□□ 0.084e-8■■□□□ 13
DROSHAQ9NRR4 CD59-213ENST00000533403 1847 ntTSL 3 BASIC15□□□□□ -0.014e-8■■□□□ 13
DROSHAQ9NRR4 CD59-202ENST00000395850 1889 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.144e-8■■□□□ 13
DROSHAQ9NRR4 CD59-209ENST00000527926 633 ntTSL 313.68□□□□□ -0.224e-8■■□□□ 13
DROSHAQ9NRR4 CD59-203ENST00000415002 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.244e-8■■□□□ 13
DROSHAQ9NRR4 CREBRF-205ENST00000522692 2466 ntTSL 1 (best) BASIC13.13□□□□□ -0.318e-6■■□□□ 13
DROSHAQ9NRR4 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.364e-8■■□□□ 13
DROSHAQ9NRR4 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC12.27□□□□□ -0.454e-8■■□□□ 13
DROSHAQ9NRR4 CREBRF-204ENST00000520464 5163 ntTSL 211.29□□□□□ -0.68e-6■■□□□ 13
DROSHAQ9NRR4 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC11.01□□□□□ -0.654e-8■■□□□ 13
DROSHAQ9NRR4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.678e-6■■□□□ 13
DROSHAQ9NRR4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.73□□□□□ -1.811e-6■■□□□ 13
DROSHAQ9NRR4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC40.82■■■■■ 4.122e-7■■□□□ 13
DROSHAQ9NRR4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC40.82■■■■■ 4.122e-7■■□□□ 13
DROSHAQ9NRR4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC29.36■■■□□ 2.292e-7■■□□□ 13
DROSHAQ9NRR4 ZNF706-210ENST00000520454 488 ntTSL 328.77■■■□□ 2.22e-7■■□□□ 13
DROSHAQ9NRR4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC28.34■■■□□ 2.132e-7■■□□□ 13
DROSHAQ9NRR4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.262e-7■■□□□ 13
DROSHAQ9NRR4 CYBRD1-207ENST00000494587 549 ntTSL 427.33■■□□□ 1.978e-16■■□□□ 13
DROSHAQ9NRR4 CYBRD1-205ENST00000468308 763 ntTSL 324.42■■□□□ 1.58e-16■■□□□ 13
DROSHAQ9NRR4 CYBRD1-206ENST00000474182 465 ntTSL 523.35■■□□□ 1.338e-16■■□□□ 13
DROSHAQ9NRR4 CYBRD1-202ENST00000375252 3540 ntTSL 1 (best) BASIC16.36■□□□□ 0.218e-16■■□□□ 13
DROSHAQ9NRR4 CYBRD1-201ENST00000321348 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.228e-16■■□□□ 13
DROSHAQ9NRR4 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC11.33□□□□□ -0.68e-16■■□□□ 13
DROSHAQ9NRR4 MCF2L-214ENST00000423251 734 ntTSL 328.68■■■□□ 2.183e-7■■□□□ 13
DROSHAQ9NRR4 FBXO17-205ENST00000599418 2222 ntTSL 224.77■■□□□ 1.563e-7■■□□□ 13
DROSHAQ9NRR4 FBXO17-206ENST00000599598 510 ntTSL 522.75■■□□□ 1.233e-7■■□□□ 13
DROSHAQ9NRR4 MCF2L-210ENST00000409954 574 ntTSL 522.51■■□□□ 1.193e-7■■□□□ 13
DROSHAQ9NRR4 FBXO17-204ENST00000597696 932 ntTSL 221.13■□□□□ 0.973e-7■■□□□ 13
DROSHAQ9NRR4 MCF2L-202ENST00000375597 3413 ntTSL 1 (best) BASIC15.82■□□□□ 0.123e-7■■□□□ 13
DROSHAQ9NRR4 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.172e-6■■□□□ 13
DROSHAQ9NRR4 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.032e-6■■□□□ 13
DROSHAQ9NRR4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC29.66■■■□□ 2.345e-7■■□□□ 13
DROSHAQ9NRR4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC24.73■■□□□ 1.555e-7■■□□□ 13
DROSHAQ9NRR4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC23.36■■□□□ 1.335e-7■■□□□ 13
DROSHAQ9NRR4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC22.93■■□□□ 1.265e-7■■□□□ 13
DROSHAQ9NRR4 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.645e-7■■□□□ 13
DROSHAQ9NRR4 PLEKHH3-203ENST00000587627 1047 ntTSL 536.04■■■■□ 3.361e-6■■□□□ 13
DROSHAQ9NRR4 PLEKHH3-202ENST00000456950 2406 ntTSL 234.48■■■■□ 3.111e-6■■□□□ 13
DROSHAQ9NRR4 PLEKHH3-205ENST00000591196 2640 ntTSL 1 (best)31.77■■■□□ 2.681e-6■■□□□ 13
DROSHAQ9NRR4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC28.24■■■□□ 2.111e-6■■□□□ 13
DROSHAQ9NRR4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.841e-6■■□□□ 13
DROSHAQ9NRR4 PLEKHH3-208ENST00000591544 617 ntTSL 325.42■■□□□ 1.661e-6■■□□□ 13
DROSHAQ9NRR4 PLEKHH3-207ENST00000591490 4339 ntTSL 221.15■□□□□ 0.981e-6■■□□□ 13
DROSHAQ9NRR4 CCDC88A-203ENST00000412148 2880 ntTSL 1 (best)8.41□□□□□ -1.067e-7■■□□□ 13
DROSHAQ9NRR4 CCDC88A-205ENST00000426576 4500 ntTSL 1 (best)3.88□□□□□ -1.797e-7■■□□□ 13
DROSHAQ9NRR4 CCDC88A-208ENST00000444458 4236 ntTSL 22.32□□□□□ -2.047e-7■■□□□ 13
DROSHAQ9NRR4 TANGO2-225ENST00000490121 125 ntTSL 316.63■□□□□ 0.254e-9■■□□□ 13
DROSHAQ9NRR4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC26.99■■□□□ 1.913e-6■■□□□ 13
DROSHAQ9NRR4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.733e-6■■□□□ 13
DROSHAQ9NRR4 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC19.05■□□□□ 0.643e-6■■□□□ 13
DROSHAQ9NRR4 ORMDL3-207ENST00000584000 572 ntTSL 427.62■■■□□ 2.011e-6■■□□□ 13
DROSHAQ9NRR4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.298e-8■■□□□ 13
DROSHAQ9NRR4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC35.35■■■■□ 3.258e-8■■□□□ 13
DROSHAQ9NRR4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.78e-8■■□□□ 13
DROSHAQ9NRR4 PTOV1-209ENST00000597793 1716 ntTSL 1 (best)29.46■■■□□ 2.318e-8■■□□□ 13
DROSHAQ9NRR4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC24.61■■□□□ 1.538e-8■■□□□ 13
DROSHAQ9NRR4 PTOV1-210ENST00000598325 1438 ntTSL 523.55■■□□□ 1.368e-8■■□□□ 13
DROSHAQ9NRR4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC22.66■■□□□ 1.228e-8■■□□□ 13
DROSHAQ9NRR4 PTOV1-218ENST00000601612 1480 ntTSL 220.64■□□□□ 0.898e-8■■□□□ 13
DROSHAQ9NRR4 CROCCP2-201ENST00000362058 2029 ntTSL 235.45■■■■□ 3.274e-9■■□□□ 12.9
DROSHAQ9NRR4 CROCCP2-203ENST00000635081 1904 ntTSL 530.67■■■□□ 2.54e-9■■□□□ 12.9
DROSHAQ9NRR4 CROCCP2-206ENST00000639594 2175 ntTSL 1 (best)27.58■■■□□ 2.014e-9■■□□□ 12.9
DROSHAQ9NRR4 CROCCP2-202ENST00000412962 2773 ntBASIC25.92■■□□□ 1.744e-9■■□□□ 12.9
DROSHAQ9NRR4 CROCCP2-204ENST00000639456 2575 ntTSL 525.34■■□□□ 1.654e-9■■□□□ 12.9
DROSHAQ9NRR4 TCF25-222ENST00000568412 797 ntTSL 326.77■■□□□ 1.884e-6■■□□□ 12.9
Retrieved 100 of 16,331 protein–RNA pairs in 102.1 ms