Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VTA1Q9NP79 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VTA1Q9NP79 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VTA1Q9NP79 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VTA1Q9NP79 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VTA1Q9NP79 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VTA1Q9NP79 AC113404.2-201ENST00000507884 177 ntBASIC20.69■□□□□ 0.9
VTA1Q9NP79 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VTA1Q9NP79 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.69■□□□□ 0.9
VTA1Q9NP79 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VTA1Q9NP79 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VTA1Q9NP79 AL161938.1-201ENST00000569833 2180 ntBASIC20.69■□□□□ 0.9
VTA1Q9NP79 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VTA1Q9NP79 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VTA1Q9NP79 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VTA1Q9NP79 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VTA1Q9NP79 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VTA1Q9NP79 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VTA1Q9NP79 AKR1C7P-201ENST00000305623 895 ntBASIC20.68■□□□□ 0.9
VTA1Q9NP79 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.68■□□□□ 0.9
VTA1Q9NP79 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.68■□□□□ 0.9
VTA1Q9NP79 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.68■□□□□ 0.9
VTA1Q9NP79 MINOS1P3-201ENST00000457048 203 ntBASIC20.68■□□□□ 0.9
VTA1Q9NP79 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.68■□□□□ 0.9
VTA1Q9NP79 AL662844.1-201ENST00000546340 181 ntBASIC20.68■□□□□ 0.9
VTA1Q9NP79 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.68■□□□□ 0.9
VTA1Q9NP79 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.68■□□□□ 0.9
VTA1Q9NP79 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VTA1Q9NP79 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.68■□□□□ 0.9
VTA1Q9NP79 AC009102.3-201ENST00000623118 1491 ntBASIC20.68■□□□□ 0.9
VTA1Q9NP79 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.68■□□□□ 0.9
VTA1Q9NP79 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
VTA1Q9NP79 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
VTA1Q9NP79 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.67■□□□□ 0.9
VTA1Q9NP79 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VTA1Q9NP79 AFG3L1P-217ENST00000557444 2447 ntBASIC20.67■□□□□ 0.9
VTA1Q9NP79 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VTA1Q9NP79 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VTA1Q9NP79 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VTA1Q9NP79 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
VTA1Q9NP79 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
VTA1Q9NP79 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.67■□□□□ 0.9
VTA1Q9NP79 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VTA1Q9NP79 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VTA1Q9NP79 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VTA1Q9NP79 NUS1P2-201ENST00000417358 873 ntBASIC20.67■□□□□ 0.9
VTA1Q9NP79 POM121L3P-201ENST00000419331 1163 ntBASIC20.67■□□□□ 0.9
VTA1Q9NP79 AP000347.1-202ENST00000435868 847 ntBASIC20.67■□□□□ 0.9
VTA1Q9NP79 SAPCD2P3-201ENST00000455031 850 ntBASIC20.67■□□□□ 0.9
VTA1Q9NP79 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.67■□□□□ 0.9
VTA1Q9NP79 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.67■□□□□ 0.9
VTA1Q9NP79 SLC25A6P4-201ENST00000586535 553 ntBASIC20.67■□□□□ 0.9
VTA1Q9NP79 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
VTA1Q9NP79 REXO1L6P-202ENST00000619970 1078 ntBASIC20.67■□□□□ 0.9
VTA1Q9NP79 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VTA1Q9NP79 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VTA1Q9NP79 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VTA1Q9NP79 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VTA1Q9NP79 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
VTA1Q9NP79 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VTA1Q9NP79 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VTA1Q9NP79 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VTA1Q9NP79 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VTA1Q9NP79 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VTA1Q9NP79 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
VTA1Q9NP79 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VTA1Q9NP79 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.66■□□□□ 0.9
VTA1Q9NP79 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.66■□□□□ 0.9
VTA1Q9NP79 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VTA1Q9NP79 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
VTA1Q9NP79 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VTA1Q9NP79 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VTA1Q9NP79 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.66■□□□□ 0.9
VTA1Q9NP79 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
VTA1Q9NP79 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
VTA1Q9NP79 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VTA1Q9NP79 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.66■□□□□ 0.9
VTA1Q9NP79 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VTA1Q9NP79 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.66■□□□□ 0.9
VTA1Q9NP79 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VTA1Q9NP79 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.66■□□□□ 0.9
VTA1Q9NP79 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VTA1Q9NP79 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.66■□□□□ 0.9
VTA1Q9NP79 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VTA1Q9NP79 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
VTA1Q9NP79 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VTA1Q9NP79 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VTA1Q9NP79 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.66■□□□□ 0.9
VTA1Q9NP79 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
VTA1Q9NP79 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VTA1Q9NP79 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VTA1Q9NP79 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
VTA1Q9NP79 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.65■□□□□ 0.9
VTA1Q9NP79 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VTA1Q9NP79 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VTA1Q9NP79 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.65■□□□□ 0.9
VTA1Q9NP79 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VTA1Q9NP79 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VTA1Q9NP79 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VTA1Q9NP79 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms