Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.52■■□□□ 1.04
EFCC1Q9HA90 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
EFCC1Q9HA90 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.52■■□□□ 1.04
EFCC1Q9HA90 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
EFCC1Q9HA90 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.52■■□□□ 1.03
EFCC1Q9HA90 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
EFCC1Q9HA90 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 AC018445.3-201ENST00000624177 1945 ntBASIC21.51■■□□□ 1.03
EFCC1Q9HA90 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 FAM197Y8-203ENST00000450145 560 ntBASIC21.51■■□□□ 1.03
EFCC1Q9HA90 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 TERC-201ENST00000602385 541 ntBASIC21.51■■□□□ 1.03
EFCC1Q9HA90 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
EFCC1Q9HA90 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 RNPS1P1-201ENST00000507437 918 ntBASIC21.5■■□□□ 1.03
EFCC1Q9HA90 AC106730.1-201ENST00000566722 1090 ntBASIC21.5■■□□□ 1.03
EFCC1Q9HA90 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EFCC1Q9HA90 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 AL031284.1-201ENST00000419297 478 ntBASIC21.49■■□□□ 1.03
EFCC1Q9HA90 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
EFCC1Q9HA90 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.48■■□□□ 1.03
EFCC1Q9HA90 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.48■■□□□ 1.03
EFCC1Q9HA90 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EFCC1Q9HA90 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.48■■□□□ 1.03
EFCC1Q9HA90 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
EFCC1Q9HA90 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
EFCC1Q9HA90 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EFCC1Q9HA90 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
EFCC1Q9HA90 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
EFCC1Q9HA90 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.48■■□□□ 1.03
EFCC1Q9HA90 AP003733.1-201ENST00000491725 852 ntBASIC21.48■■□□□ 1.03
EFCC1Q9HA90 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.48■■□□□ 1.03
EFCC1Q9HA90 AL390719.2-201ENST00000606993 987 ntBASIC21.48■■□□□ 1.03
EFCC1Q9HA90 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.48■■□□□ 1.03
EFCC1Q9HA90 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
EFCC1Q9HA90 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
EFCC1Q9HA90 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
EFCC1Q9HA90 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
EFCC1Q9HA90 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
EFCC1Q9HA90 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms