Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR1BQ9H9Y6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 PCDHB18P-201ENST00000524813 2368 ntBASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 STARP1-201ENST00000397973 869 ntBASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 AC083849.1-201ENST00000615227 514 ntBASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 AP001271.2-201ENST00000624018 1556 ntBASIC18.3■□□□□ 0.52
POLR1BQ9H9Y6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 KRT8P41-201ENST00000533985 1514 ntBASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR1BQ9H9Y6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 AC104581.1-202ENST00000635932 2618 ntBASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms