Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
KRTAP3-3Q9BYR6 FAM213A-201ENST00000372181 2058 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC022415.1-201ENST00000472362 1517 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 PCNAP3-201ENST00000397222 778 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC024937.2-201ENST00000411669 1242 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC246680.2-201ENST00000422106 389 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC124944.2-201ENST00000429866 1242 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 BET1-205ENST00000433727 1031 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 ELOCP10-201ENST00000440624 327 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 RAB11AP1-201ENST00000442978 646 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC092754.2-201ENST00000463506 460 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 APOPT1-206ENST00000476323 757 ntTSL 5 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC104066.1-201ENST00000512377 751 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 CETN3-203ENST00000522083 1026 ntTSL 2 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 CETN3-204ENST00000522565 867 ntTSL 2 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AP001646.1-201ENST00000527936 915 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 RBM7-208ENST00000545678 867 ntTSL 3 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AP000619.2-201ENST00000546014 969 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC010653.1-201ENST00000571108 881 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 MYL12A-206ENST00000578611 1004 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 MIR3648-2-201ENST00000581792 180 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 ELOCP34-201ENST00000604436 327 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AL021807.1-201ENST00000607175 565 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 CBR3-AS1-208ENST00000608690 590 ntTSL 5 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC004067.1-201ENST00000608733 700 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC019131.2-201ENST00000609071 870 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AL354950.1-201ENST00000614150 568 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC090510.3-201ENST00000615831 821 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 MIR3648-1-201ENST00000615959 180 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC012676.4-201ENST00000616838 582 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AC016769.4-201ENST00000616893 535 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 CYCSP41-201ENST00000616920 296 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 HNRNPKP2-201ENST00000447355 1390 ntBASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 RELL1-202ENST00000454158 1350 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 AL162591.1-201ENST00000424435 1756 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC11.51□□□□□ -0.57
KRTAP3-3Q9BYR6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 KRTAP13-3-201ENST00000390690 704 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 UBE2V1P15-201ENST00000407776 448 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 MTATP6P20-201ENST00000414147 562 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AF228730.4-201ENST00000421457 183 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 NDUFA5P1-201ENST00000433858 341 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AL596276.1-201ENST00000434465 418 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 MTND1P30-201ENST00000441241 901 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AL160408.4-201ENST00000441360 933 ntTSL 2 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 MTCO2P25-201ENST00000447065 681 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AC012493.1-201ENST00000453252 760 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AC104982.1-201ENST00000478775 574 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 GCSHP1-201ENST00000512554 484 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AC104115.2-201ENST00000523026 687 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 OR4A49P-201ENST00000527050 632 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 LINC01499-202ENST00000529282 563 ntTSL 4 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms