Protein–RNA interactions for Protein: Q99966

CITED1, Cbp/p300-interacting transactivator 1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1Q99966 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CITED1Q99966 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CITED1Q99966 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CITED1Q99966 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.42□□□□□ -0.1
CITED1Q99966 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.42□□□□□ -0.1
CITED1Q99966 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CITED1Q99966 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.42□□□□□ -0.1
CITED1Q99966 IGHV3-47-201ENST00000425060 335 ntBASIC14.42□□□□□ -0.1
CITED1Q99966 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.42□□□□□ -0.1
CITED1Q99966 SAPCD2P3-201ENST00000455031 850 ntBASIC14.42□□□□□ -0.1
CITED1Q99966 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CITED1Q99966 MIR3180-4-201ENST00000582223 153 ntBASIC14.42□□□□□ -0.1
CITED1Q99966 AC120114.3-201ENST00000611923 658 ntBASIC14.42□□□□□ -0.1
CITED1Q99966 AC117500.6-201ENST00000624871 588 ntBASIC14.42□□□□□ -0.1
CITED1Q99966 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CITED1Q99966 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CITED1Q99966 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.42□□□□□ -0.1
CITED1Q99966 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CITED1Q99966 AC008556.1-201ENST00000610908 2040 ntBASIC14.42□□□□□ -0.1
CITED1Q99966 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CITED1Q99966 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CITED1Q99966 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CITED1Q99966 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.42□□□□□ -0.1
CITED1Q99966 AL512353.2-201ENST00000448759 1962 ntBASIC14.42□□□□□ -0.1
CITED1Q99966 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CITED1Q99966 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CITED1Q99966 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.41□□□□□ -0.1
CITED1Q99966 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
CITED1Q99966 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.41□□□□□ -0.1
CITED1Q99966 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.41□□□□□ -0.1
CITED1Q99966 GUSBP12-201ENST00000513727 720 ntBASIC14.41□□□□□ -0.1
CITED1Q99966 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.41□□□□□ -0.1
CITED1Q99966 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.41□□□□□ -0.1
CITED1Q99966 AC064862.7-201ENST00000604520 867 ntBASIC14.41□□□□□ -0.1
CITED1Q99966 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.41□□□□□ -0.1
CITED1Q99966 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.41□□□□□ -0.1
CITED1Q99966 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.41□□□□□ -0.1
CITED1Q99966 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CITED1Q99966 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.41□□□□□ -0.1
CITED1Q99966 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.41□□□□□ -0.1
CITED1Q99966 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.41□□□□□ -0.1
CITED1Q99966 AC099778.1-201ENST00000568593 1911 ntBASIC14.41□□□□□ -0.1
CITED1Q99966 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CITED1Q99966 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.41□□□□□ -0.1
CITED1Q99966 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CITED1Q99966 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CITED1Q99966 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CITED1Q99966 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CITED1Q99966 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CITED1Q99966 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CITED1Q99966 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
CITED1Q99966 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CITED1Q99966 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.4□□□□□ -0.1
CITED1Q99966 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.4□□□□□ -0.1
CITED1Q99966 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CITED1Q99966 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CITED1Q99966 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CITED1Q99966 AKR1C7P-201ENST00000305623 895 ntBASIC14.4□□□□□ -0.1
CITED1Q99966 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CITED1Q99966 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.4□□□□□ -0.1
CITED1Q99966 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CITED1Q99966 IGHGP-201ENST00000390555 1178 ntBASIC14.4□□□□□ -0.1
CITED1Q99966 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CITED1Q99966 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.4□□□□□ -0.1
CITED1Q99966 TSPY12P-201ENST00000421279 868 ntBASIC14.4□□□□□ -0.1
CITED1Q99966 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.4□□□□□ -0.1
CITED1Q99966 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CITED1Q99966 VENTXP7-201ENST00000475503 772 ntBASIC14.4□□□□□ -0.1
CITED1Q99966 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.4□□□□□ -0.1
CITED1Q99966 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.4□□□□□ -0.1
CITED1Q99966 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.4□□□□□ -0.1
CITED1Q99966 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CITED1Q99966 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.4□□□□□ -0.1
CITED1Q99966 AL671883.3-201ENST00000603274 991 ntBASIC14.4□□□□□ -0.1
CITED1Q99966 AL592071.1-201ENST00000611956 408 ntBASIC14.4□□□□□ -0.1
CITED1Q99966 REXO1L6P-202ENST00000619970 1078 ntBASIC14.4□□□□□ -0.1
CITED1Q99966 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.4□□□□□ -0.1
CITED1Q99966 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CITED1Q99966 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.4□□□□□ -0.1
CITED1Q99966 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms