Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SPENQ96T58 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.67■□□□□ 0.26
SPENQ96T58 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SPENQ96T58 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SPENQ96T58 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
SPENQ96T58 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPENQ96T58 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPENQ96T58 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.67■□□□□ 0.26
SPENQ96T58 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SPENQ96T58 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.67■□□□□ 0.26
SPENQ96T58 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPENQ96T58 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.67■□□□□ 0.26
SPENQ96T58 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.67■□□□□ 0.26
SPENQ96T58 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPENQ96T58 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPENQ96T58 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPENQ96T58 MIR564-202ENST00000385049 94 ntBASIC16.66■□□□□ 0.26
SPENQ96T58 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SPENQ96T58 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SPENQ96T58 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.66■□□□□ 0.26
SPENQ96T58 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPENQ96T58 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPENQ96T58 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.66■□□□□ 0.26
SPENQ96T58 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPENQ96T58 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SPENQ96T58 MTMR9LP-203ENST00000426597 1545 ntBASIC16.66■□□□□ 0.26
SPENQ96T58 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.66■□□□□ 0.26
SPENQ96T58 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPENQ96T58 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SPENQ96T58 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.66■□□□□ 0.26
SPENQ96T58 FGFR3P6-201ENST00000457012 610 ntBASIC16.66■□□□□ 0.26
SPENQ96T58 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.66■□□□□ 0.26
SPENQ96T58 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.66■□□□□ 0.26
SPENQ96T58 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPENQ96T58 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPENQ96T58 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPENQ96T58 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SPENQ96T58 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPENQ96T58 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.66■□□□□ 0.26
SPENQ96T58 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.66■□□□□ 0.26
SPENQ96T58 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPENQ96T58 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.66■□□□□ 0.26
SPENQ96T58 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SPENQ96T58 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPENQ96T58 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPENQ96T58 AC034236.2-201ENST00000606662 1610 ntBASIC16.65■□□□□ 0.26
SPENQ96T58 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.65■□□□□ 0.26
SPENQ96T58 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.65■□□□□ 0.26
SPENQ96T58 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
SPENQ96T58 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
SPENQ96T58 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SPENQ96T58 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SPENQ96T58 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPENQ96T58 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.65■□□□□ 0.26
SPENQ96T58 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPENQ96T58 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPENQ96T58 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPENQ96T58 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.65■□□□□ 0.26
SPENQ96T58 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.65■□□□□ 0.26
SPENQ96T58 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SPENQ96T58 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SPENQ96T58 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPENQ96T58 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPENQ96T58 AC004817.3-201ENST00000602957 2129 ntBASIC16.65■□□□□ 0.26
SPENQ96T58 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPENQ96T58 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.65■□□□□ 0.26
SPENQ96T58 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.65■□□□□ 0.26
SPENQ96T58 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.65■□□□□ 0.26
SPENQ96T58 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPENQ96T58 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SPENQ96T58 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.64■□□□□ 0.26
SPENQ96T58 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.64■□□□□ 0.26
SPENQ96T58 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPENQ96T58 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.64■□□□□ 0.25
SPENQ96T58 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
SPENQ96T58 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPENQ96T58 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPENQ96T58 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.64■□□□□ 0.25
SPENQ96T58 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPENQ96T58 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPENQ96T58 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.64■□□□□ 0.25
SPENQ96T58 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPENQ96T58 AL357033.4-201ENST00000617703 1807 ntBASIC16.64■□□□□ 0.25
SPENQ96T58 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPENQ96T58 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.64■□□□□ 0.25
SPENQ96T58 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.64■□□□□ 0.25
SPENQ96T58 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.64■□□□□ 0.25
SPENQ96T58 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPENQ96T58 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
SPENQ96T58 PMS2P7-201ENST00000506558 1336 ntBASIC16.64■□□□□ 0.25
SPENQ96T58 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPENQ96T58 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPENQ96T58 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPENQ96T58 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPENQ96T58 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.64■□□□□ 0.25
SPENQ96T58 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.64■□□□□ 0.25
SPENQ96T58 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPENQ96T58 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.64■□□□□ 0.25
SPENQ96T58 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPENQ96T58 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms